RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 OR4F5Q8NH21 305 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 DTD1Q8TEA8 209 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 SRSF8Q9BRL6 282 aaKnown RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 ZNF580Q9UK33 172 aa10□□□□□ -0.81
HDAC6-229ENST00000486665 RCL1Q9Y2P8 373 aaKnown RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 LSM5Q9Y4Y9 91 aaKnown RBP10□□□□□ -0.81
HDAC6-229ENST00000486665 CLPSL1A2RUU4 121 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 INS-IGF2F8WCM5 200 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 H0YIZ8 118 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 WRBO00258 174 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 SSSCA1O60232 199 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 MED6O75586 246 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 PRH1P02810 166 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 CTRB1P17538 263 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 PAX9P55771 341 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 ERHP84090 104 aaKnown RBP9.99□□□□□ -0.81
HDAC6-229ENST00000486665 CYCSP99999 105 aaKnown RBP9.99□□□□□ -0.81
HDAC6-229ENST00000486665 CD83Q01151 205 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 FOXL1Q12952 345 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 Q5BKY6 102 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 CTRB2Q6GPI1 263 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 CENPVQ7Z7K6 275 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-229ENST00000486665 FAM110DQ8TAY7 271 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-229ENST00000486665 TMEM68Q96MH6 324 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 C11orf1Q9H5F2 150 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 ENY2Q9NPA8 101 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 HEYLQ9NQ87 328 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-229ENST00000486665 CACFD1Q9UGQ2 172 aa9.99□□□□□ -0.81
HDAC6-229ENST00000486665 PSMB11A5LHX3 300 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 NPIPB5A8MRT5 1133 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 FBXO24O75426 580 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 GIPP09681 153 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-229ENST00000486665 MFAP2P55001 183 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 PROK1P58294 105 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 S100A10P60903 97 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 LRRC37A5PQ49AS3 106 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 TREML4Q6UXN2 200 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 HSD17B13Q7Z5P4 300 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-229ENST00000486665 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-229ENST00000486665 TMEM170AQ8WVE7 144 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 P2RX4Q99571 388 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 RNF114Q9Y508 228 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 DMRT1Q9Y5R6 373 aa9.98□□□□□ -0.81
HDAC6-229ENST00000486665 TRAV14DV4A0A0A6YYC5 116 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 MPC2O95563 127 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 IGLV1-40P01703 118 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 RNASE2P10153 161 aaKnown RBP9.97□□□□□ -0.81
HDAC6-229ENST00000486665 RAP2BP61225 183 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 HIST2H2BDQ6DRA6 164 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 LCNL1Q6ZST4 164 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 KLHDC1Q8N7A1 406 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 ST6GAL2Q96JF0 529 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 SMIM8Q96KF7 97 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 MS4A10Q96PG2 267 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 FANCD2OSQ96PS1 177 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 KLK15Q9H2R5 256 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 HIPK2Q9H2X6 1198 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 RANGRFQ9HD47 186 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-229ENST00000486665 OR5AC2Q9NZP5 309 aa9.97□□□□□ -0.81
HDAC6-229ENST00000486665 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
HDAC6-229ENST00000486665 WNK1Q9H4A3 2382 aa9.96□□□□□ -0.81
HDAC6-229ENST00000486665 G3V3Q6 166 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 H3BP45 60 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 SMLR1H3BR10 107 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 DEDDO75618 318 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 IGHG4P01861 327 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 SNCAP37840 140 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 SLC25A24Q6NUK1 477 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 MRPL41Q8IXM3 137 aaKnown RBP9.96□□□□□ -0.82
HDAC6-229ENST00000486665 OR5AU1Q8NGC0 362 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 OR4C12Q96R67 309 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 RAB40CQ96S21 281 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 GON7Q9BXV9 100 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 ZNF355PQ9NSJ1 428 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 PSENENQ9NZ42 101 aa9.96□□□□□ -0.82
HDAC6-229ENST00000486665 C15orf62A8K5M9 175 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 L7N2F9 121 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 CCNKO75909 580 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 NDUFB8O95169 186 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 IFNA10P01566 189 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 DEFA4P12838 97 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 HTR2BP41595 481 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 VAMP2P63027 116 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 SLC35B1P78383 322 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 DEFA5Q01523 94 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 CD300CQ08708 224 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-229ENST00000486665 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 TCTEX1D4Q5JR98 221 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 SPANXN5Q5MJ07 72 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 PVRIGQ6DKI7 326 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 PRSS54Q6PEW0 395 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 SLC24A4Q8NFF2 622 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 OR2T35Q8NGX2 323 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 OR1P1Q8NH06 330 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms