RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 MFNGO00587 321 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 JTBO76095 146 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 IGKV1D-12P01611 117 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 HLA-AP01891 365 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 GAPDHP04406 335 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 ISG15P05161 165 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 OR8U8P0C7N1 319 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 VDAC1P21796 283 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 S100PP25815 95 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 PSMB6P28072 239 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 HTR2CP28335 458 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RBP2P50120 134 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RAB5CP51148 216 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RAB7AP51149 207 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 INSL3P51460 131 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 MTCP1P56278 107 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 GNB1P62873 340 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 DHRS2Q13268 280 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RNASE12Q5GAN4 147 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 C1orf100Q5SVJ3 147 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 TMEM244Q5VVB8 128 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 SSX6Q7RTT6 188 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 ZNF429Q86V71 674 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 CATSPERDQ86XM0 798 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 TGIF2LXQ8IUE1 241 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 Q8N9W7 124 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 OR5D18Q8NGL1 313 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 OR13A1Q8NGR1 328 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 OR13C5Q8NGS8 318 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 OR10X1Q8NGY0 326 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RFESDQ8TAC1 157 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 TSEN15Q8WW01 171 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RGP1Q92546 391 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 DCUN1D4Q92564 292 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 SPACA5Q96QH8 159 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 HSPB9Q9BQS6 159 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 TM2D3Q9BRN9 247 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 ATG5Q9H1Y0 275 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 SAV1Q9H4B6 383 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 CHMP1AQ9HD42 196 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 COA4Q9NYJ1 87 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 CALYQ9NYX4 217 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 IDI2-AS1Q9NZ38 188 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 OR6C3Q9NZP0 311 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 RAB22AQ9UL26 194 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 PLECQ15149 4684 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
TMEM39A-209ENST00000486235 TRAV39A0A0B4J263 110 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 IGHV1-3A0A0C4DH29 117 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 TMEM272A0A1B0GTI8 110 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 LOC107986453A0A1B0GWG9 222 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 OVOL1O14753 267 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 HSD17B6O14756 317 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 DEGS1O15121 323 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 CA11O75493 328 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 IGHG4P01861 327 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 MT-ND4LP03901 98 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 CD3DP04234 171 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 IFNA6P05013 189 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 FCER2P06734 321 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 VPREB1P12018 145 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 IGFBP3P17936 291 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 ZBTB25P24278 435 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PSMB8P28062 276 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 BDKRB2P30411 391 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 CAV2P51636 162 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 ZNF616Q08AN1 781 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PDZK1IP1Q13113 114 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 EBI3Q14213 229 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PEA15Q15121 130 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 TMEM128Q5BJH2 165 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PLAC9Q5JTB6 97 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 LY6G6FQ5SQ64 297 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 Q6P435 159 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PRSS54Q6PEW0 395 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 KCTD9Q7L273 389 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 HAPLN4Q86UW8 402 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PUSL1Q8N0Z8 303 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PRSS35Q8N3Z0 413 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 Q8N6K4 173 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 CCDC54Q8NEL0 328 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 LFNGQ8NES3 379 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 OR5AP2Q8NGF4 316 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 OR2T10Q8NGZ9 312 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 MRGPRDQ8TDS7 321 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 SFT2D1Q8WV19 159 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PPP1R1CQ8WVI7 109 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 ARPC1AQ92747 370 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 FAM46BQ96A09 425 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 ADAT3Q96EY9 351 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 SMIM8Q96KF7 97 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 AQP10Q96PS8 301 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 S1PR3Q99500 378 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 RASL11BQ9BPW5 248 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 PARP11Q9NR21 331 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 UQCC1Q9NVA1 299 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 METTL1Q9UBP6 276 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 GHRLQ9UBU3 117 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 ZNF580Q9UK33 172 aa4.96□□□□□ -1.62
TMEM39A-209ENST00000486235 WSB1Q9Y6I7 421 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms