RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 PRNDQ9UKY0 176 aa13.63□□□□□ -0.23
MCF2L-226ENST00000486210 FOXA2Q9Y261 457 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-226ENST00000486210 TRAV41A0A0B4J266 112 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 DUXBA0A1W2PPF3 345 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 MPTX1A8MV57 137 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 ST8SIA3O43173 380 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 PRAF2O60831 178 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 DHFRP00374 187 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 IGHG4P01861 327 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 FGF2P09038 288 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
MCF2L-226ENST00000486210 TMEM65Q6PI78 240 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 UNQ5815/PRO19632Q6UWF5 114 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 C12orf45Q8N5I9 185 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-226ENST00000486210 RNF152Q8N8N0 203 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 UXS1Q8NBZ7 420 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 C4orf3Q8WVX3 66 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 PHB2Q99623 299 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 COMMD5Q9GZQ3 224 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 ZNF580Q9UK33 172 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 CSMD3Q7Z407 3707 aa13.62□□□□□ -0.23
MCF2L-226ENST00000486210 SEC14L6B5MCN3 397 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 RBMXL2O75526 392 aaKnown RBP13.61□□□□□ -0.23
MCF2L-226ENST00000486210 NXPH3O95157 252 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 SPINK9Q5DT21 86 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 MINDY2Q8NBR6 621 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 OR10W1Q8NGF6 305 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 OR1L8Q8NGR8 309 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 GPN1Q9HCN4 374 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-226ENST00000486210 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 TMED3Q9Y3Q3 217 aa13.61□□□□□ -0.23
MCF2L-226ENST00000486210 LCE6AA0A183 80 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 SNRPGP15A8MWD9 76 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 CCSO14618 274 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 SOX15O60248 233 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 TRAPPC2P0DI81 140 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 TRAPPC2BP0DI82 140 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 SULT1A3P0DMM9 295 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 SULT1A4P0DMN0 295 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 AREGP15514 252 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
MCF2L-226ENST00000486210 SMCO1Q147U7 214 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 TATDN3Q17R31 274 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 AKIRIN2Q53H80 203 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 C19orf35Q6ZS72 473 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 ZNF429Q86V71 674 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 OR5T1Q8NG75 326 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 HINT2Q9BX68 163 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-226ENST00000486210 FKBP11Q9NYL4 201 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 ALG5Q9Y673 324 aa13.6□□□□□ -0.23
MCF2L-226ENST00000486210 A0A1B0GU03 582 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 A0A1W2PN81 502 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 PITX3O75364 302 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 REG1AP05451 166 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 CHRNA7P36544 502 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 TMEM267Q0VDI3 215 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-226ENST00000486210 AARDQ4LEZ3 155 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 SBSPONQ8IVN8 264 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 RCHY1Q96PM5 261 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 SPIN2AQ99865 258 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 SPIN2BQ9BPZ2 258 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 ZNF257Q9Y2Q1 563 aa13.59□□□□□ -0.23
MCF2L-226ENST00000486210 PIGBOS1A0A0B4J2F0 54 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 IGLC7A0M8Q6 106 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 C7orf66A4D0T2 115 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 IFNA17P01571 189 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 OR8U8P0C7N1 319 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 PSMB8P28062 276 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 PRCDQ00LT1 54 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 OR11H1Q8NG94 326 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 COA4Q9NYJ1 87 aa13.58□□□□□ -0.24
MCF2L-226ENST00000486210 LY86O95711 162 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 IFNA21P01568 189 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 IGLV1-40P01703 118 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 SLC25A6P12236 298 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 WT1-ASQ06250 92 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 TTC9CQ8N5M4 171 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 OR1S1Q8NH92 325 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 UBE2E2Q96LR5 201 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 TMEM68Q96MH6 324 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 KLK15Q9H2R5 256 aa13.57□□□□□ -0.24
MCF2L-226ENST00000486210 ZNF256Q9Y2P7 627 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-226ENST00000486210 PRH1P02810 166 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 OR13C7P0DN81 318 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 PSMB6P28072 239 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 INSL3P51460 131 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 FHL3Q13643 280 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
MCF2L-226ENST00000486210 OR1N2Q8NGR9 330 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 OR52E5Q8NH55 327 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 PDCD10Q9BUL8 212 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 SMAD5-AS1Q9Y6J3 95 aa13.56□□□□□ -0.24
MCF2L-226ENST00000486210 C13orf42A0A1B0GVH6 325 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 NPIPB5A8MRT5 1133 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 FAM25EA8MYX2 175 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 SIX6O95475 246 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 CRYGCP07315 174 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms