RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 STRAPQ9Y3F4 350 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 SAA2-SAA4A0A096LPE2 208 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 KRBOX1C9JBD0 128 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 IFNA5P01569 189 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 FGF2P09038 288 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 OR8U8P0C7N1 319 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 SAA2P0DJI9 122 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 SPP1P10451 314 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 IGLL1P15814 213 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 SPCS3P61009 180 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 NHLH2Q02577 135 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 AANATQ16613 207 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 ATP6V1FQ16864 119 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 RPL39P5Q59GN2 51 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 FAM53AQ6NSI3 398 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 IL34Q6ZMJ4 242 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF429Q86V71 674 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 PUSL1Q8N0Z8 303 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 Q8N2B8 174 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 COMMD1Q8N668 190 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 OR11H6Q8NGC7 330 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 OR4A16Q8NH70 328 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 TMED6Q8WW62 240 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 MARC2Q969Z3 335 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 ATP5SQ99766 215 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF251Q9BRH9 671 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 WNT10AQ9GZT5 417 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 PARP11Q9NR21 331 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 AURKAIP1Q9NWT8 199 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
TMEM39A-208ENST00000486159 IGHV2-26A0A0B4J1V2 119 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 J3QR06 171 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 SLC31A2O15432 143 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 TMEM50AO95807 157 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 APOA2P02652 100 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 MC5RP33032 325 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 PRRX1P54821 245 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 ATP5IP56385 69 aaPredicted RBP7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 OR2B11Q5JQS5 317 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 TMEM14EPQ6UXP3 125 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 DPPA3Q6W0C5 159 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 OR4P4Q8NGL7 312 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 OR5C1Q8NGR4 320 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 OR13D1Q8NGV5 346 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 OSR1Q8TAX0 266 aaPredicted RBP7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 RBMXL1Q96E39 390 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 MALSU1Q96EH3 234 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 SMIM3Q9BZL3 60 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 RBKSQ9H477 322 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 WFDC1Q9HC57 220 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 FKBP11Q9NYL4 201 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 PRNDQ9UKY0 176 aa7.44□□□□□ -1.22
TMEM39A-208ENST00000486159 NOTCH3Q9UM47 2321 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF705EA8MWA4 302 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 SOX15O60248 233 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 RBMXL2O75526 392 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 AMY1AP04745 511 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 DYNLT3P51808 116 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 F2RL1P55085 397 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 FAM74A1Q5RGS3 127 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 PDPNQ86YL7 162 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF383Q8NA42 475 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 OR5AN1Q8NGI8 311 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 OR10X1Q8NGY0 326 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 OR4A5Q8NH83 315 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 SCGB1C1Q8TD33 95 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 DTD1Q8TEA8 209 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 PINX1Q96BK5 328 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 CXorf58Q96LI9 332 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 TMEM133Q9H2Q1 129 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 HIPK2Q9H2X6 1198 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 SLC35D1Q9NTN3 355 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 FOXA2Q9Y261 457 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF257Q9Y2Q1 563 aa7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 AMMECR1Q9Y4X0 333 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-208ENST00000486159 CEBPZOSA8MTT3 80 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 I3L521 148 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 CST7O76096 145 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 CRYZL1O95825 349 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 IGHV3-7P01780 117 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 CT45A6P0DMU7 189 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 CT45A5P0DMU8 189 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 CT45A7P0DMV0 189 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 ZP3P21754 424 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 VDAC2P45880 294 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 GNG10P50151 68 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 IZUMO4Q1ZYL8 232 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 TMEM177Q53S58 311 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 NDUFA11Q86Y39 141 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 ABHD12Q8N2K0 398 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 LFNGQ8NES3 379 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 OR5AU1Q8NGC0 362 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 LYPD6BQ8NI32 183 aa7.42□□□□□ -1.22
TMEM39A-208ENST00000486159 VSTM2AQ8TAG5 236 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms