RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 LINC00299Q6ZSB3 139 aa9.21□□□□□ -0.94
HLA-DOA-204ENST00000485901 ZNF429Q86V71 674 aa9.21□□□□□ -0.94
HLA-DOA-204ENST00000485901 RNASE11Q8TAA1 199 aaKnown RBP9.21□□□□□ -0.94
HLA-DOA-204ENST00000485901 IGLV11-55A0A075B6I3 123 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 CENPXA8MT69 81 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 NDUFB8O95169 186 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 P0C879 139 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 ANXA3P12429 323 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 WT1-ASQ06250 92 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 EXOSC2Q13868 293 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 SLC25A24Q6NUK1 477 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 FAM219AQ8IW50 185 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 SELENOHQ8IZQ5 122 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 OR1L6Q8NGR2 347 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 RBPMSQ93062 196 aaKnown RBP9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 GALNT14Q96FL9 552 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 CXorf58Q96LI9 332 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 SDHCQ99643 169 aaPredicted RBP9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 PDCD10Q9BUL8 212 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 BATF3Q9NR55 127 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 TMEM56-RWDD3S4R434 201 aa9.2□□□□□ -0.94
HLA-DOA-204ENST00000485901 A0A0B4J293 547 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 IFNA17P01571 189 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 ERHP84090 104 aaKnown RBP9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 PRCDQ00LT1 54 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 KLF5Q13887 457 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 IZUMO4Q1ZYL8 232 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 CNPY1Q3B7I2 92 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 TMEM268Q5VZI3 342 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 C19orf35Q6ZS72 473 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 TMED4Q7Z7H5 227 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 TMEM230Q96A57 120 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 ELOVL1Q9BW60 279 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 PLEKHA3Q9HB20 300 aa9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
HLA-DOA-204ENST00000485901 TRBV7-1A0A0A6YYK4 115 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 TRBV12-3P01733 135 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 IL7P13232 177 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 SRPXP78539 464 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 TMEM187Q14656 261 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 RBMS2Q15434 407 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 RPEL1Q2QD12 228 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 TMEM128Q5BJH2 165 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 CASC10Q5T4H9 136 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 ACSM6Q6P461 480 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 LGI3Q8N145 548 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 LHFPL5Q8TAF8 219 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 VN1R17PQ8TDU5 208 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 OR4C12Q96R67 309 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 C7orf50Q9BRJ6 194 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 CACFD1Q9UGQ2 172 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 F11RQ9Y624 299 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 SMAD5-AS1Q9Y6J3 95 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 TENM2Q9NT68 2774 aa9.18□□□□□ -0.94
HLA-DOA-204ENST00000485901 HUWE1Q7Z6Z7 4374 aaKnown RBP9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 LINC00854A0A1B0GVQ3 168 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 GGCTO75223 188 aaKnown RBP9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 CLEC3BP05452 202 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 SUPT4H1P63272 117 aaKnown RBP9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 CLEC19AQ6UXS0 136 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 OR2C3Q8N628 320 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 OR1P1Q8NH06 330 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 S100ZQ8WXG8 99 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 ENY2Q9NPA8 101 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 ZNF256Q9Y2P7 627 aaPredicted RBP9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 DMRT1Q9Y5R6 373 aa9.17□□□□□ -0.94
HLA-DOA-204ENST00000485901 SACSQ9NZJ4 4579 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 A0A0G2JRQ6 117 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 INS-IGF2F8WCM5 200 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 BMPR1BO00238 502 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 SAP30O75446 220 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 IGHV3-23P01764 117 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 VAMP1P23763 118 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 SNCAP37840 140 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 CCR6P51684 374 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 SYNJ2BPP57105 145 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 SPCS3P61009 180 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 Q6ZRM9 215 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 CENPSQ8N2Z9 138 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 OR9G4Q8NGQ1 327 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 OR52E5Q8NH55 327 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 CCDC32Q9BV29 185 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 S4R3C0 116 aa9.16□□□□□ -0.94
HLA-DOA-204ENST00000485901 MFSD2BA6NFX1 497 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 PPP5D1E7EU14 171 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 NDUFB6O95139 128 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 SFT2D2O95562 160 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 ARL3P36405 182 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms