RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FAM240BA0A1B0GVZ2 78 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 LINC01619G3V211 115 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 NXPH3O95157 252 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 NDUFB8O95169 186 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 TCRBP04435 133 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 OR8U8P0C7N1 319 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 IGLL1P15814 213 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 HIST1H1BP16401 226 aaKnown RBP9.15□□□□□ -0.94
HPS4-214ENST00000485842 SLURP1P55000 103 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 UBE2MP61081 183 aaKnown RBP9.15□□□□□ -0.94
HPS4-214ENST00000485842 IFITM3Q01628 133 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 FHL3Q13643 280 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 C15orf32Q32M92 178 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 C4orf46Q504U0 113 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 C1QL4Q86Z23 238 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 ENY2Q9NPA8 101 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.15□□□□□ -0.94
HPS4-214ENST00000485842 NUDT15Q9NV35 164 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 NBEAL1Q6ZS30 2694 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 C9orf170A2RU37 121 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 G3V4G9 280 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 CYB5BO43169 146 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 IGHV3-23P01764 117 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 HSPB1P04792 205 aaKnown RBP9.14□□□□□ -0.95
HPS4-214ENST00000485842 OR4E1P0C645 316 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 SULT1A3P0DMM9 295 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 SULT1A4P0DMN0 295 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 DHRS2Q13268 280 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 NMSQ5H8A3 153 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 SLC25A24Q6NUK1 477 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 ZNF343Q6P1L6 599 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 LYG2Q86SG7 212 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 OR2C3Q8N628 320 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
HPS4-214ENST00000485842 F11RQ9Y624 299 aaKnown RBP9.14□□□□□ -0.95
HPS4-214ENST00000485842 IGHV3-21A0A0B4J1V1 117 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 PIGBOS1A0A0B4J2F0 54 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 DUXBA0A1W2PPF3 345 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 MFSD2BA6NFX1 497 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 CEBPZOSA8MTT3 80 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 HOXB5P09067 269 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 HOXD3P31249 432 aaPredicted RBP9.13□□□□□ -0.95
HPS4-214ENST00000485842 MFAP2P55001 183 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 ERHP84090 104 aaKnown RBP9.13□□□□□ -0.95
HPS4-214ENST00000485842 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 LRTM2Q8N967 370 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 WFDC9Q8NEX5 89 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 OR52B4Q8NGK2 314 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 OR1S1Q8NH92 325 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 ENKURQ8TC29 256 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 RCC1LQ96I51 464 aaKnown RBP9.13□□□□□ -0.95
HPS4-214ENST00000485842 RANGRFQ9HD47 186 aaPredicted RBP9.13□□□□□ -0.95
HPS4-214ENST00000485842 THYN1Q9P016 225 aa9.13□□□□□ -0.95
HPS4-214ENST00000485842 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
HPS4-214ENST00000485842 FBN3Q75N90 2809 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 H2AFB2P0C5Z0 115 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 ZP3P21754 424 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 SNCAP37840 140 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 SPCS3P61009 180 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 KLK9Q2XQG4 91 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 COQ8AQ8NI60 647 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 DLX4Q92988 240 aaPredicted RBP9.12□□□□□ -0.95
HPS4-214ENST00000485842 EEF1AKMT3Q96AZ1 226 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 MISP3Q96FF7 219 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 KLK9Q9UKQ9 250 aa9.12□□□□□ -0.95
HPS4-214ENST00000485842 NOTCH3Q9UM47 2321 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.11□□□□□ -0.95
HPS4-214ENST00000485842 A0A1B0GU03 582 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 PPP5D1E7EU14 171 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 OVOL1O14753 267 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 ADAP1O75689 374 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 DUS4LO95620 317 aaKnown RBP9.11□□□□□ -0.95
HPS4-214ENST00000485842 ARL3P36405 182 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 DEFA1P59665 94 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 DEFA3P59666 94 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 RPEL1Q2QD12 228 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 AARDQ4LEZ3 155 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 GGNBP1Q5YKI7 109 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 CLEC19AQ6UXS0 136 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 ZNF114Q8NC26 417 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 OR1L6Q8NGR2 347 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 CXorf58Q96LI9 332 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 SEC22CQ9BRL7 303 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 MCRIP2Q9BUT9 160 aaKnown RBP9.11□□□□□ -0.95
HPS4-214ENST00000485842 HEYLQ9NQ87 328 aaPredicted RBP9.11□□□□□ -0.95
HPS4-214ENST00000485842 TMED3Q9Y3Q3 217 aa9.11□□□□□ -0.95
HPS4-214ENST00000485842 SEC14L6B5MCN3 397 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 BMPR1BO00238 502 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 RNASE2P10153 161 aaKnown RBP9.1□□□□□ -0.95
HPS4-214ENST00000485842 GPR183P32249 361 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 FAM209BQ5JX69 171 aa9.1□□□□□ -0.95
HPS4-214ENST00000485842 C11orf87Q6NUJ2 197 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms