RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 K7EMT4 169 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 GPR31O00270 319 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 UBE2CO00762 179 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 TMEM127O75204 238 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 NAT1P18440 290 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 UBE2NLQ5JXB2 153 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 TMEM69Q5SWH9 247 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 CEMP1Q6PRD7 247 aaPredicted RBP14.23□□□□□ -0.13
COL27A1-205ENST00000485397 STPG3Q8N7X2 389 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 RNF183Q96D59 192 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 ATP6V0BQ99437 205 aa14.23□□□□□ -0.13
COL27A1-205ENST00000485397 KIR2DL5BA0A0G2JN68 375 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 KIR2DL5BA0A0G2JPC4 375 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 OR4C46A6NHA9 309 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 CTSGP08311 255 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 RPS19P39019 145 aaKnown RBP14.22□□□□□ -0.13
COL27A1-205ENST00000485397 CMTM1Q8IZ96 169 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 KIR2DL5AQ8N109 375 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 CADM3Q8N126 398 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 SAMD12Q8N8I0 201 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 TSPAN14Q8NG11 270 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 OR6F1Q8NGZ6 308 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 OR5B3Q8NH48 314 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 KIR2DL5BQ8NHK3 375 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 TMEM56Q96MV1 263 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 SMPXQ9UHP9 88 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 PRNDQ9UKY0 176 aa14.22□□□□□ -0.13
COL27A1-205ENST00000485397 HLA-DMAP28067 261 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 TAS2R46P59540 309 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 PHLDA2Q53GA4 152 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 LYSMD2Q8IV50 215 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 CROCCP3Q8IVE0 287 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 APRG1Q8IVJ8 170 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 RNF2Q99496 336 aa14.21□□□□□ -0.13
COL27A1-205ENST00000485397 IGHV3-49A0A0A0MS15 119 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 C15orf61A6NNL5 157 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 C15orf62A8K5M9 175 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 FCGR2BP31994 310 aaPredicted RBP14.2□□□□□ -0.14
COL27A1-205ENST00000485397 PRSS3P35030 304 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 HRH1P35367 487 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 LSM3P62310 102 aaKnown RBP14.2□□□□□ -0.14
COL27A1-205ENST00000485397 ZNF124Q15973 351 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 OR1P1Q8NH06 330 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 GALNT14Q96FL9 552 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 MAP6D1Q9H9H5 199 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 TMEM14BQ9NUH8 114 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 FKBP11Q9NYL4 201 aa14.2□□□□□ -0.14
COL27A1-205ENST00000485397 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 CHEK1O14757 476 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 TFPI2P48307 235 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 KCTD21Q4G0X4 260 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 SLC25A46Q96AG3 418 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 MISP3Q96FF7 219 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 TSC22D3Q99576 134 aa14.19□□□□□ -0.14
COL27A1-205ENST00000485397 IGKV3-7A0A075B6H7 116 aa14.18□□□□□ -0.14
COL27A1-205ENST00000485397 I3L2K1 104 aa14.18□□□□□ -0.14
COL27A1-205ENST00000485397 NUPL2O15504 423 aaKnown RBP14.18□□□□□ -0.14
COL27A1-205ENST00000485397 YIF1AO95070 293 aa14.18□□□□□ -0.14
COL27A1-205ENST00000485397 IGHV3-48P01763 117 aa14.18□□□□□ -0.14
COL27A1-205ENST00000485397 ATF4P18848 351 aaPredicted RBP14.18□□□□□ -0.14
COL27A1-205ENST00000485397 TMEM116Q8NCL8 245 aa14.18□□□□□ -0.14
COL27A1-205ENST00000485397 IGHV3OR16-13A0A075B7E8 117 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 IGHV3-74A0A0B4J1X5 117 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 IGKV1-39P01597 117 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 IGKV1D-39P04432 117 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 EIF4EP06730 217 aaKnown RBP14.17□□□□□ -0.14
COL27A1-205ENST00000485397 MFAP4P55083 255 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 RELQ04864 619 aaPredicted RBP14.17□□□□□ -0.14
COL27A1-205ENST00000485397 TBC1D26Q86UD7 250 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 GPX8Q8TED1 209 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 YIPF6Q96EC8 236 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 SEC22AQ96IW7 307 aa14.17□□□□□ -0.14
COL27A1-205ENST00000485397 KLK5Q9Y337 293 aaPredicted RBP14.17□□□□□ -0.14
COL27A1-205ENST00000485397 MT-CO2P00403 227 aa14.16□□□□□ -0.14
COL27A1-205ENST00000485397 TSPAN5P62079 268 aa14.16□□□□□ -0.14
COL27A1-205ENST00000485397 GBGT1Q8N5D6 347 aa14.16□□□□□ -0.14
COL27A1-205ENST00000485397 OR4A16Q8NH70 328 aa14.16□□□□□ -0.14
COL27A1-205ENST00000485397 OR10C1Q96KK4 312 aa14.16□□□□□ -0.14
COL27A1-205ENST00000485397 TRAV14DV4A0A0A6YYC5 116 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 PRCDQ00LT1 54 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 FAM90A2PQ658T7 463 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 H2BFWTQ7Z2G1 175 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 TMEM217Q8N7C4 229 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 PHLDA1Q8WV24 401 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-205ENST00000485397 MRGPRFQ96AM1 343 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 PINX1Q96BK5 328 aaKnown RBP14.15□□□□□ -0.14
COL27A1-205ENST00000485397 TXN2Q99757 166 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 C6orf62Q9GZU0 229 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-205ENST00000485397 NXF2Q9GZY0 626 aaKnown RBP14.15□□□□□ -0.14
COL27A1-205ENST00000485397 CSTL1Q9H114 145 aa14.15□□□□□ -0.14
COL27A1-205ENST00000485397 FAM212BQ9NTI7 297 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-205ENST00000485397 MPTX1A8MV57 137 aa14.14□□□□□ -0.15
COL27A1-205ENST00000485397 S100GP29377 79 aa14.14□□□□□ -0.15
COL27A1-205ENST00000485397 RPP25LQ8N5L8 163 aaKnown RBP14.14□□□□□ -0.15
COL27A1-205ENST00000485397 ZNF114Q8NC26 417 aa14.14□□□□□ -0.15
COL27A1-205ENST00000485397 COMMD3Q9UBI1 195 aa14.14□□□□□ -0.15
COL27A1-205ENST00000485397 KMT2AQ03164 3969 aa14.13□□□□□ -0.15
COL27A1-205ENST00000485397 GNG7O60262 68 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms