RNA–Protein interactions for RNA: ENST00000484986.1

PTPRN-215, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-215ENST00000484986 KLK5Q9Y337 293 aaPredicted RBP16.42■□□□□ 0.22
PTPRN-215ENST00000484986 NEDD8Q15843 81 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 ODF3L2Q3SX64 289 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 Q56UQ5 140 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 UBE2NLQ5JXB2 153 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 UBAC2Q8NBM4 344 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 OR6F1Q8NGZ6 308 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 FCAMRQ8WWV6 532 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 RNF183Q96D59 192 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 GALNT14Q96FL9 552 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 CHRDL1Q9BU40 450 aa16.41■□□□□ 0.22
PTPRN-215ENST00000484986 GPR31O00270 319 aa16.4■□□□□ 0.22
PTPRN-215ENST00000484986 S100GP29377 79 aa16.4■□□□□ 0.22
PTPRN-215ENST00000484986 MFAP2P55001 183 aa16.4■□□□□ 0.22
PTPRN-215ENST00000484986 CMC4P56277 68 aaPredicted RBP16.4■□□□□ 0.22
PTPRN-215ENST00000484986 RELQ04864 619 aaPredicted RBP16.4■□□□□ 0.22
PTPRN-215ENST00000484986 TMEM69Q5SWH9 247 aa16.4■□□□□ 0.22
PTPRN-215ENST00000484986 ANAPC10Q9UM13 185 aa16.4■□□□□ 0.22
PTPRN-215ENST00000484986 IGHV3-21A0A0B4J1V1 117 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 K7EIM0 57 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 NUPL2O15504 423 aaKnown RBP16.39■□□□□ 0.21
PTPRN-215ENST00000484986 PMP2P02689 132 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 NAT1P18440 290 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 G6PCP35575 357 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 OR1P1Q8NH06 330 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 NSG2Q9Y328 171 aa16.39■□□□□ 0.21
PTPRN-215ENST00000484986 F8W735 103 aaPredicted RBP16.38■□□□□ 0.21
PTPRN-215ENST00000484986 CTSDP07339 412 aaPredicted RBP16.38■□□□□ 0.21
PTPRN-215ENST00000484986 ADMP35318 185 aa16.38■□□□□ 0.21
PTPRN-215ENST00000484986 LPCAT3Q6P1A2 487 aa16.38■□□□□ 0.21
PTPRN-215ENST00000484986 MAP6D1Q9H9H5 199 aa16.38■□□□□ 0.21
PTPRN-215ENST00000484986 FAM212BQ9NTI7 297 aaPredicted RBP16.38■□□□□ 0.21
PTPRN-215ENST00000484986 TMEM14BQ9NUH8 114 aa16.38■□□□□ 0.21
PTPRN-215ENST00000484986 SMPXQ9UHP9 88 aa16.38■□□□□ 0.21
PTPRN-215ENST00000484986 ZNF207O43670 478 aaKnown RBP16.37■□□□□ 0.21
PTPRN-215ENST00000484986 CTSGP08311 255 aa16.37■□□□□ 0.21
PTPRN-215ENST00000484986 RPL35AP18077 110 aaKnown RBP16.37■□□□□ 0.21
PTPRN-215ENST00000484986 PRSS3P35030 304 aa16.37■□□□□ 0.21
PTPRN-215ENST00000484986 TAS2R20P59543 309 aa16.37■□□□□ 0.21
PTPRN-215ENST00000484986 EWSR1Q01844 656 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPRN-215ENST00000484986 SAMD12Q8N8I0 201 aa16.37■□□□□ 0.21
PTPRN-215ENST00000484986 TXN2Q99757 166 aa16.37■□□□□ 0.21
PTPRN-215ENST00000484986 IGHV3OR16-8A0A075B7F1 116 aa16.36■□□□□ 0.21
PTPRN-215ENST00000484986 C15orf61A6NNL5 157 aa16.36■□□□□ 0.21
PTPRN-215ENST00000484986 KCTD21Q4G0X4 260 aa16.36■□□□□ 0.21
PTPRN-215ENST00000484986 TMEM116Q8NCL8 245 aa16.36■□□□□ 0.21
PTPRN-215ENST00000484986 CMTM3Q96MX0 182 aa16.36■□□□□ 0.21
PTPRN-215ENST00000484986 IGHV7-4-1A0A0J9YVY3 117 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 YIF1AO95070 293 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 FCGR2BP31994 310 aaPredicted RBP16.35■□□□□ 0.21
PTPRN-215ENST00000484986 MFAP4P55083 255 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 SLC25A46Q96AG3 418 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 RNF2Q99496 336 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 RHPN1-AS1Q9BWJ2 59 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 FXYD6Q9H0Q3 95 aa16.35■□□□□ 0.21
PTPRN-215ENST00000484986 CHEK1O14757 476 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 CD5P06127 495 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 HRH1P35367 487 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 TSPAN5P62079 268 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 OR4A16Q8NH70 328 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 MISP3Q96FF7 219 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 OR10C1Q96KK4 312 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 CSTL1Q9H114 145 aa16.34■□□□□ 0.21
PTPRN-215ENST00000484986 TRAV14DV4A0A0A6YYC5 116 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 RPS19P39019 145 aaKnown RBP16.33■□□□□ 0.2
PTPRN-215ENST00000484986 PAFAH1B2P68402 229 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 PHLDA2Q53GA4 152 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 H2BFWTQ7Z2G1 175 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 LYSMD2Q8IV50 215 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 ZNF114Q8NC26 417 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 GATAD1Q8WUU5 269 aa16.33■□□□□ 0.2
PTPRN-215ENST00000484986 DBX1A6NMT0 343 aa16.32■□□□□ 0.2
PTPRN-215ENST00000484986 MPTX1A8MV57 137 aa16.32■□□□□ 0.2
PTPRN-215ENST00000484986 I3L2K1 104 aa16.32■□□□□ 0.2
PTPRN-215ENST00000484986 HLA-DMAP28067 261 aa16.32■□□□□ 0.2
PTPRN-215ENST00000484986 APRG1Q8IVJ8 170 aa16.32■□□□□ 0.2
PTPRN-215ENST00000484986 NXF2Q9GZY0 626 aaKnown RBP16.32■□□□□ 0.2
PTPRN-215ENST00000484986 SMIM31A0A1B0GVY4 71 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 ERHP84090 104 aaKnown RBP16.31■□□□□ 0.2
PTPRN-215ENST00000484986 PRCDQ00LT1 54 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 TBC1D26Q86UD7 250 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 PHLDA1Q8WV24 401 aaPredicted RBP16.31■□□□□ 0.2
PTPRN-215ENST00000484986 SEC22AQ96IW7 307 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 GINS3Q9BRX5 216 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 SCPEP1Q9HB40 452 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 VCX3AQ9NNX9 186 aa16.31■□□□□ 0.2
PTPRN-215ENST00000484986 GNG7O60262 68 aa16.3■□□□□ 0.2
PTPRN-215ENST00000484986 MT-CO2P00403 227 aa16.3■□□□□ 0.2
PTPRN-215ENST00000484986 TFPI2P48307 235 aa16.3■□□□□ 0.2
PTPRN-215ENST00000484986 GPX8Q8TED1 209 aa16.3■□□□□ 0.2
PTPRN-215ENST00000484986 MFFQ9GZY8 342 aa16.3■□□□□ 0.2
PTPRN-215ENST00000484986 KMT2AQ03164 3969 aa16.3■□□□□ 0.2
PTPRN-215ENST00000484986 EIF4EP06730 217 aaKnown RBP16.29■□□□□ 0.2
PTPRN-215ENST00000484986 TGFBR1P36897 503 aa16.29■□□□□ 0.2
PTPRN-215ENST00000484986 UCP3P55916 312 aa16.29■□□□□ 0.2
PTPRN-215ENST00000484986 HSPE1P61604 102 aaKnown RBP16.29■□□□□ 0.2
PTPRN-215ENST00000484986 RARRES2Q99969 163 aa16.29■□□□□ 0.2
PTPRN-215ENST00000484986 IGKV3-7A0A075B6H7 116 aa16.28■□□□□ 0.2
PTPRN-215ENST00000484986 IGHV3-49A0A0A0MS15 119 aa16.28■□□□□ 0.2
PTPRN-215ENST00000484986 NPBWR1P48145 328 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms