RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MBD3L1Q8WWY6 194 aa13.4□□□□□ -0.26
CTSA-207ENST00000484855 MGST2Q99735 147 aa13.4□□□□□ -0.26
CTSA-207ENST00000484855 POLR3KQ9Y2Y1 108 aaPredicted RBP13.4□□□□□ -0.26
CTSA-207ENST00000484855 OOSP1A8MZH6 123 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 GNB1P62873 340 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 MMDQ15546 238 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
CTSA-207ENST00000484855 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
CTSA-207ENST00000484855 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 OR10G9Q8NGN4 311 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 OR10G7Q8NGN6 311 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 SEC11CQ9BY50 192 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 FAM208BQ5VWN6 2430 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 IGHV4-30-2A0A087WSY4 118 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 MOSP00540 346 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 OR13C7P0DN81 318 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 COMPP49747 757 aaPredicted RBP13.39□□□□□ -0.27
CTSA-207ENST00000484855 PPT1P50897 306 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 UBE2E1P51965 193 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
CTSA-207ENST00000484855 C10orf91Q5T1B1 145 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
CTSA-207ENST00000484855 TBL2Q9Y4P3 447 aaKnown RBP13.39□□□□□ -0.27
CTSA-207ENST00000484855 LSM4Q9Y4Z0 139 aaKnown RBP13.39□□□□□ -0.27
CTSA-207ENST00000484855 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 RBFOX3A6NFN3 312 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 SOX15O60248 233 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 M6PRP20645 277 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 OPRK1P41145 380 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 SUB1P53999 127 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTSA-207ENST00000484855 DYNAPQ8N1N2 210 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 SLC25A22Q9H936 323 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 SLC39A9Q9NUM3 307 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 CARHSP1Q9Y2V2 147 aaKnown RBP13.38□□□□□ -0.27
CTSA-207ENST00000484855 NBR2O15453 112 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 CD24P25063 80 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 FGF8P55075 233 aaPredicted RBP13.38□□□□□ -0.27
CTSA-207ENST00000484855 HES1Q14469 280 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 FAM122CQ6P4D5 195 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 C1orf159Q96HA4 380 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 RARRES2Q99969 163 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 KCNIP2Q9NS61 270 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
CTSA-207ENST00000484855 CTXND1A0A1B0GTU2 59 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 REG1AP05451 166 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 SNRNP70P08621 437 aaKnown RBP13.37□□□□□ -0.27
CTSA-207ENST00000484855 CD69Q07108 199 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 RAB31Q13636 194 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 HAGHQ16775 308 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
CTSA-207ENST00000484855 P2RX4Q99571 388 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 ACTR3CQ9C0K3 210 aaPredicted RBP13.37□□□□□ -0.27
CTSA-207ENST00000484855 IGLC7A0M8Q6 106 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 EIF3GO75821 320 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTSA-207ENST00000484855 MIC13Q5XKP0 118 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 SVBPQ8N300 66 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 OR2T10Q8NGZ9 312 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 PXMP4Q9Y6I8 212 aa13.37□□□□□ -0.27
CTSA-207ENST00000484855 PAX1P15863 534 aa13.36□□□□□ -0.27
CTSA-207ENST00000484855 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
CTSA-207ENST00000484855 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CTSA-207ENST00000484855 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
CTSA-207ENST00000484855 SMDT1Q9H4I9 107 aa13.36□□□□□ -0.27
CTSA-207ENST00000484855 GNG13Q9P2W3 67 aa13.36□□□□□ -0.27
CTSA-207ENST00000484855 CYB5BO43169 146 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 NDUFA3O95167 84 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 GAMTQ14353 236 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 ATRAIDQ6UW56 229 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 NPBQ8NG41 125 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
CTSA-207ENST00000484855 SPG11Q96JI7 2443 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 FCN1O00602 326 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 GPX4P36969 197 aaPredicted RBP13.35□□□□□ -0.27
CTSA-207ENST00000484855 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
CTSA-207ENST00000484855 DSCR9P59020 149 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 B2MP61769 119 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 ZNF506Q5JVG8 444 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 CACNG8Q8WXS5 425 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 MALSU1Q96EH3 234 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 SLC35E1Q96K37 410 aa13.35□□□□□ -0.27
CTSA-207ENST00000484855 HMGB3O15347 200 aaKnown RBP13.34□□□□□ -0.27
CTSA-207ENST00000484855 YIF1AO95070 293 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 APELAP0DMC3 54 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 DEFA4P12838 97 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 AREGP15514 252 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 SAA4P35542 130 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
CTSA-207ENST00000484855 PAX8Q06710 450 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 FBLN7Q53RD9 439 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 STPG3Q8N7X2 389 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 ZNF114Q8NC26 417 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 RAB24Q969Q5 203 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
CTSA-207ENST00000484855 ZFP92A6NM28 416 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms