RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TRIM16LQ309B1 348 aa7.67□□□□□ -1.18
CPSF4-213ENST00000484112 DCUN1D4Q92564 292 aa7.67□□□□□ -1.18
CPSF4-213ENST00000484112 RBPMSQ93062 196 aaKnown RBP7.67□□□□□ -1.18
CPSF4-213ENST00000484112 RRNAD1Q96FB5 475 aaKnown RBP7.67□□□□□ -1.18
CPSF4-213ENST00000484112 CXorf58Q96LI9 332 aa7.67□□□□□ -1.18
CPSF4-213ENST00000484112 CITED4Q96RK1 184 aa7.67□□□□□ -1.18
CPSF4-213ENST00000484112 PEF1Q9UBV8 284 aaKnown RBP7.67□□□□□ -1.18
CPSF4-213ENST00000484112 TMEM56-RWDD3S4R434 201 aa7.67□□□□□ -1.18
CPSF4-213ENST00000484112 IGLV11-55A0A075B6I3 123 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.66□□□□□ -1.18
CPSF4-213ENST00000484112 TRBV7-1A0A0A6YYK4 115 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 TRAV3A0A0B4J244 114 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 A0A1B0GW64 132 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 HMX3A6NHT5 357 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 CGB1A6NKQ9 187 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 E7EUB6 86 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 IGHV3-11P01762 117 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 P0C879 139 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 GP9P14770 177 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 AREGP15514 252 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 UBE2MP61081 183 aaKnown RBP7.66□□□□□ -1.18
CPSF4-213ENST00000484112 HSPE1P61604 102 aaKnown RBP7.66□□□□□ -1.18
CPSF4-213ENST00000484112 PRCDQ00LT1 54 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 RBMS2Q15434 407 aaKnown RBP7.66□□□□□ -1.18
CPSF4-213ENST00000484112 TATDN3Q17R31 274 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 C15orf32Q32M92 178 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 AARDQ4LEZ3 155 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 TMEM128Q5BJH2 165 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 ZNF57Q68EA5 555 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-213ENST00000484112 ZNF114Q8NC26 417 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 CASTOR1Q8WTX7 329 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 GLYATL2Q8WU03 294 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
CPSF4-213ENST00000484112 IGHV4OR15-8A0A075B7B6 117 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 A0A087WW49 117 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 DUXBA0A1W2PPF3 345 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 IGKV1-5P01602 117 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 OR5AC1P0C628 307 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 APELAP0DMC3 54 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 SLURP1P55000 103 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 OR1P1Q8NH06 330 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 OR52E5Q8NH55 327 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 VN1R17PQ8TDU5 208 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 DLX4Q92988 240 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-213ENST00000484112 EEF1AKMT3Q96AZ1 226 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 FANCD2OSQ96PS1 177 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 PDCD10Q9BUL8 212 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 CCDC32Q9BV29 185 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 ELOVL1Q9BW60 279 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 ALX4Q9H161 411 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-213ENST00000484112 FBXL7Q9UJT9 491 aa7.65□□□□□ -1.18
CPSF4-213ENST00000484112 F11RQ9Y624 299 aaKnown RBP7.65□□□□□ -1.18
CPSF4-213ENST00000484112 A0A0B4J2A0 478 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 RBMXL2O75526 392 aaKnown RBP7.64□□□□□ -1.19
CPSF4-213ENST00000484112 OR2J3O76001 311 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 OR13C7P0DN81 318 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 ERHP84090 104 aaKnown RBP7.64□□□□□ -1.19
CPSF4-213ENST00000484112 WT1-ASQ06250 92 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 EXOSC2Q13868 293 aaKnown RBP7.64□□□□□ -1.19
CPSF4-213ENST00000484112 KLF5Q13887 457 aaPredicted RBP7.64□□□□□ -1.19
CPSF4-213ENST00000484112 BAK1Q16611 211 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 SP6Q3SY56 376 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 ACSM6Q6P461 480 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 LGI3Q8N145 548 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 OR2C3Q8N628 320 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 RNASE11Q8TAA1 199 aaKnown RBP7.64□□□□□ -1.19
CPSF4-213ENST00000484112 TMEM230Q96A57 120 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 PLEKHA3Q9HB20 300 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.64□□□□□ -1.19
CPSF4-213ENST00000484112 SIGLEC8Q9NYZ4 499 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 SHPKQ9UHJ6 478 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 NSG2Q9Y328 171 aa7.64□□□□□ -1.19
CPSF4-213ENST00000484112 A0A0B4J293 547 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 CORTO00230 105 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 GGCTO75223 188 aaKnown RBP7.63□□□□□ -1.19
CPSF4-213ENST00000484112 UPK1BO75841 260 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 PRH1P02810 166 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 IL7P13232 177 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 MYOD1P15172 320 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 AKR1C4P17516 323 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 MECP2P51608 486 aaKnown RBP7.63□□□□□ -1.19
CPSF4-213ENST00000484112 SUB1P53999 127 aaKnown RBP eCLIP7.63□□□□□ -1.19
CPSF4-213ENST00000484112 SPCS3P61009 180 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 TMEM187Q14656 261 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 RPEL1Q2QD12 228 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 TMEM268Q5VZI3 342 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 Q6ZNX1 250 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 HAPLN4Q86UW8 402 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 SELENOHQ8IZQ5 122 aaKnown RBP7.63□□□□□ -1.19
CPSF4-213ENST00000484112 CENPSQ8N2Z9 138 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 LRTM2Q8N967 370 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 OR10W1Q8NGF6 305 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 SDHCQ99643 169 aaPredicted RBP7.63□□□□□ -1.19
CPSF4-213ENST00000484112 HINT2Q9BX68 163 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 PEMTQ9UBM1 199 aa7.63□□□□□ -1.19
CPSF4-213ENST00000484112 DBX1A6NMT0 343 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 LGALS9O00182 355 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 NDUFB6O95139 128 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 NDUFB8O95169 186 aa7.62□□□□□ -1.19
CPSF4-213ENST00000484112 IFNA17P01571 189 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms