RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 WNT4P56705 351 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 LINC00336Q6ZUF6 198 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 KCTD9Q7L273 389 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 MAFIPQ8WZ33 124 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 PHYHIPQ92561 330 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 GALNT14Q96FL9 552 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 URB1-AS1Q96HZ7 61 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 RARRES2Q99969 163 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 CABLES2Q9BTV7 478 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 CCDC90BQ9GZT6 254 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 C5orf66Q9H5L9 145 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 MRPL27Q9P0M9 148 aaKnown RBP4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 UFC1Q9Y3C8 167 aa4.39□□□□□ -1.71
SEMA3D-204ENST00000484038 IGHV3OR16-8A0A075B7F1 116 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 TRBV6-7A0A0A0MS04 114 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 EFCAB10A6NFE3 127 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 OR4C46A6NHA9 309 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 FOXI3A8MTJ6 420 aaPredicted RBP4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 KRTAP29-1A8MX34 341 aaPredicted RBP4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 E7EUB6 86 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 TSPAN4O14817 238 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 KBTBD11O94819 623 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 C8orf88P0DMB2 117 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 MYOD1P15172 320 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 RPA2P15927 270 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 PSMB6P28072 239 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 PSMD7P51665 324 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 TMEM50BP56557 158 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 CLDN12P56749 244 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 TCTAP57738 103 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 GABARAPL2P60520 117 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 RAB11BQ15907 218 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 HSD17B12Q53GQ0 312 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 PLET1Q6UQ28 207 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 AHSA2Q719I0 299 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 APRG1Q8IVJ8 170 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 OR56B1Q8NGI3 324 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 OR13F1Q8NGS4 319 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 OR11H2Q8NH07 326 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 VSTM2AQ8TAG5 236 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 CD300LFQ8TDQ1 290 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 OR2A7Q96R45 310 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 C6orf62Q9GZU0 229 aaPredicted RBP4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 OR51E2Q9H255 320 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 C11orf68Q9H3H3 251 aaKnown RBP4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 SLC2A9Q9NRM0 540 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 MRPS7Q9Y2R9 242 aaKnown RBP4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 PRELID3BQ9Y3B1 194 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
SEMA3D-204ENST00000484038 A0A075B6Q4 140 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 A0A1B0GW64 132 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 MPTX1A8MV57 137 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF207O43670 478 aaKnown RBP4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 NOL3O60936 208 aaKnown RBP4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 CRYGCP07315 174 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF735P0CB33 412 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 HIST1H1BP16401 226 aaKnown RBP4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 CD36P16671 472 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 GALP22466 123 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 TFPI2P48307 235 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 MFAP2P55001 183 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 ARFRP1Q13795 201 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 LAMTOR1Q6IAA8 161 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 SSX9Q7RTT3 188 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF367Q7RTV3 350 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 MS4A15Q8N5U1 240 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 GVQW1Q8N7I0 195 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 SETD9Q8NE22 299 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 OR4S2Q8NH73 311 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 OR4A5Q8NH83 315 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 TCTEX1D2Q8WW35 142 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 RAB3CQ96E17 227 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 C20orf24Q9BUV8 137 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 CSTL1Q9H114 145 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 DAZ1Q9NQZ3 744 aaKnown RBP4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 BLOC1S6Q9UL45 172 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 APLNQ9ULZ1 77 aa4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 AK6Q9Y3D8 172 aaKnown RBP4.37□□□□□ -1.71
SEMA3D-204ENST00000484038 IGKV3-7A0A075B6H7 116 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 IGLV11-55A0A075B6I3 123 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 OR2T8A6NH00 312 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 SLC17A2O00624 439 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 DIRAS3O95661 229 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 CA1P00915 261 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 CDK1P06493 297 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 CTSDP07339 412 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 GNB3P16520 340 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF182P17025 639 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 MAS1LP35410 378 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TALDO1P37837 337 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 LSM3P62310 102 aaKnown RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 RPL30P62888 115 aaKnown RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 SPCS2Q15005 226 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 H1FOOQ8IZA3 346 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF645Q8N7E2 425 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms