RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-204ENST00000483941 PJVKQ0ZLH3 352 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 ATP6V1FQ16864 119 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 LGALSLQ3ZCW2 172 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-204ENST00000483941 TMUB2Q71RG4 321 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 OR10P1Q8NGE3 313 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 SRSF12Q8WXF0 261 aaKnown RBP11.1□□□□□ -0.63
SMAD9-204ENST00000483941 ARPC1AQ92747 370 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 ARPC5LQ9BPX5 153 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 VPREB3Q9UKI3 123 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 BORCS7-ASMTA0A0B4J1R7 106 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 RNF222A6NCQ9 220 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 FAM24AA6NFZ4 105 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 CORTO00230 105 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 OPN1MWP04001 364 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 OPN1MW2P0DN77 364 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 OPN1MW3P0DN78 364 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 NPY1RP25929 384 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
SMAD9-204ENST00000483941 CX3CL1P78423 397 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 EWSR1Q01844 656 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMAD9-204ENST00000483941 ZNF266Q14584 549 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 TMEM14EPQ6UXP3 125 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 STPG2Q8N412 459 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.09□□□□□ -0.63
SMAD9-204ENST00000483941 OR1S2Q8NGQ3 325 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 C22orf15Q8WYQ4 148 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 GGACTQ9BVM4 153 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
SMAD9-204ENST00000483941 PAIP2BQ9ULR5 123 aaKnown RBP11.09□□□□□ -0.63
SMAD9-204ENST00000483941 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 FCN1O00602 326 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 BCL2L11O43521 198 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 JTBO76095 146 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 TMEM50AO95807 157 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 IFNA4P05014 189 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 OR13C7P0DN81 318 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 CXCL2P19875 107 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 LY6EQ16553 131 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 MRGPRG-AS1Q2M3A8 158 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 SPINK9Q5DT21 86 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 SLC51BQ86UW2 128 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 ZNF114Q8NC26 417 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
SMAD9-204ENST00000483941 JMJD8Q96S16 334 aa11.08□□□□□ -0.64
SMAD9-204ENST00000483941 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
SMAD9-204ENST00000483941 H3BP45 60 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 IGHV4-59P01825 116 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 OPCMLQ14982 345 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 TUSC1Q2TAM9 212 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 LAMTOR1Q6IAA8 161 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 SGMS2Q8NHU3 365 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
SMAD9-204ENST00000483941 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
SMAD9-204ENST00000483941 SOX21Q9Y651 276 aaPredicted RBP11.07□□□□□ -0.64
SMAD9-204ENST00000483941 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 MDFIC2A0A1B0GVS7 189 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 IGSF23A1L1A6 192 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
SMAD9-204ENST00000483941 CST7O76096 145 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 IFNA5P01569 189 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 DEFA4P12838 97 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 BSXQ3C1V8 233 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 EIF5AL1Q6IS14 154 aaKnown RBP11.06□□□□□ -0.64
SMAD9-204ENST00000483941 ETV3LQ6ZN32 361 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 SIGLECL1Q8N7X8 197 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 OR5C1Q8NGR4 320 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 OR1P1Q8NH06 330 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 RBMXL1Q96E39 390 aaKnown RBP11.06□□□□□ -0.64
SMAD9-204ENST00000483941 THYN1Q9P016 225 aa11.06□□□□□ -0.64
SMAD9-204ENST00000483941 RPS10-NUDT3A0A1W2PQS6 291 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 IGLC7A0M8Q6 106 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 C15orf62A8K5M9 175 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 TEX22C9J3V5 150 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 CLDN34H7C241 214 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 MYOD1P15172 320 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 GPX4P36969 197 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-204ENST00000483941 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
SMAD9-204ENST00000483941 NHLH2Q02577 135 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 WT1-ASQ06250 92 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 SLC38A11Q08AI6 406 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 EXOSC2Q13868 293 aaKnown RBP11.05□□□□□ -0.64
SMAD9-204ENST00000483941 AKIRIN2Q53H80 203 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 C10orf55Q5SWW7 151 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 SLC35E3Q7Z769 313 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 TMEM217Q8N7C4 229 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms