RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NDUFA4O00483 81 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 NCS1P62166 190 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 ZNF124Q15973 351 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
ATG4B-221ENST00000483778 SPSB3Q6PJ21 355 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 CADM3Q8N126 398 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 BORCS5Q969J3 196 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 SEC22AQ96IW7 307 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 SPAG8Q99932 426 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-221ENST00000483778 DAZ1Q9NQZ3 744 aaKnown RBP13.34□□□□□ -0.27
ATG4B-221ENST00000483778 BIRC6Q9NR09 4857 aa13.34□□□□□ -0.27
ATG4B-221ENST00000483778 CTSDP07339 412 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-221ENST00000483778 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
ATG4B-221ENST00000483778 DEFB135Q30KP9 77 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 Q56UQ5 140 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 HSD17B13Q7Z5P4 300 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-221ENST00000483778 TBC1D26Q86UD7 250 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 SNX29P2Q8IUI4 249 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 CMTM1Q8IZ96 169 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 TSPAN14Q8NG11 270 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 SLC25A46Q96AG3 418 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 AGRNO00468 2067 aa13.33□□□□□ -0.28
ATG4B-221ENST00000483778 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 I3L2K1 104 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 K7EMT4 169 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 CYB5BO43169 146 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 SPRY2O43597 315 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 ELK1P19419 428 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 APRG1Q8IVJ8 170 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 RNF2Q99496 336 aa13.32□□□□□ -0.28
ATG4B-221ENST00000483778 M0QYG6 137 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 HPGDSO60760 199 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 VBP1P61758 197 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 TSPAN5P62079 268 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 SPINK9Q5DT21 86 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 Q6ZWC4 215 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 OR5B3Q8NH48 314 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 MISP3Q96FF7 219 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 FUNDC2Q9BWH2 189 aa13.31□□□□□ -0.28
ATG4B-221ENST00000483778 IGHV3OR16-13A0A075B7E8 117 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 A0A087WXM4 84 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 IGHV3-74A0A0B4J1X5 117 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 CHEK1O14757 476 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
ATG4B-221ENST00000483778 LAMTOR1Q6IAA8 161 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 OR1P1Q8NH06 330 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 MRGPRFQ96AM1 343 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 TMEM56Q96MV1 263 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 FKBP11Q9NYL4 201 aa13.3□□□□□ -0.28
ATG4B-221ENST00000483778 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 IGHV7-4-1A0A0J9YVY3 117 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 CXorf65A6NEN9 183 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 C15orf62A8K5M9 175 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 APOA1P02647 267 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 PI3P19957 117 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 FCGR2BP31994 310 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-221ENST00000483778 TFPI2P48307 235 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 TNFRSF9Q07011 255 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 H2BFWTQ7Z2G1 175 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 LILRB2Q8N423 598 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 RNF183Q96D59 192 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 ATP6V0BQ99437 205 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 RHPN1-AS1Q9BWJ2 59 aa13.29□□□□□ -0.28
ATG4B-221ENST00000483778 MT-CO2P00403 227 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 APOHP02749 345 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-221ENST00000483778 APOC4P55056 127 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 MFAP4P55083 255 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 UCP3P55916 312 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 FAM90A2PQ658T7 463 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 GBGT1Q8N5D6 347 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 TMEM116Q8NCL8 245 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 OR4A16Q8NH70 328 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 LINC00476Q8WZB0 136 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 NAA50Q9GZZ1 169 aaKnown RBP13.28□□□□□ -0.28
ATG4B-221ENST00000483778 MAP6D1Q9H9H5 199 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-221ENST00000483778 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
ATG4B-221ENST00000483778 OR4C46A6NHA9 309 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 YIF1AO95070 293 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 IGKV1-5P01602 117 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 BMI1P35226 326 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.29
ATG4B-221ENST00000483778 PRCDQ00LT1 54 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 LPCAT3Q6P1A2 487 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 PINX1Q96BK5 328 aaKnown RBP13.27□□□□□ -0.29
ATG4B-221ENST00000483778 OR10C1Q96KK4 312 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 TSC22D3Q99576 134 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 NXF2Q9GZY0 626 aaKnown RBP13.27□□□□□ -0.29
ATG4B-221ENST00000483778 SCPEP1Q9HB40 452 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 KLK11Q9UBX7 282 aa13.27□□□□□ -0.29
ATG4B-221ENST00000483778 A0A0B4J293 547 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 KIR2DL5BA0A0G2JN68 375 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 KIR2DL5BA0A0G2JPC4 375 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms