RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RBFOX2O43251 390 aaKnown RBP eCLIP10.25□□□□□ -0.77
VARS-226ENST00000483275 HPRT1P00492 218 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 SERPINE2P07093 398 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 TRAPPC2P0DI81 140 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 TRAPPC2BP0DI82 140 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 ZNF182P17025 639 aaPredicted RBP10.25□□□□□ -0.77
VARS-226ENST00000483275 RPL5P46777 297 aaKnown RBP10.25□□□□□ -0.77
VARS-226ENST00000483275 TAS2R20P59543 309 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
VARS-226ENST00000483275 CATR1Q13166 79 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 CTF1Q16619 201 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 POU2AF1Q16633 256 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 CD300LFQ8TDQ1 290 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 VN1R17PQ8TDU5 208 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 BSCL2Q96G97 398 aaPredicted RBP10.25□□□□□ -0.77
VARS-226ENST00000483275 RNF2Q99496 336 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 THYN1Q9P016 225 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 KLK5Q9Y337 293 aaPredicted RBP10.25□□□□□ -0.77
VARS-226ENST00000483275 OR4C46A6NHA9 309 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 K7EIM0 57 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 DEFB4AO15263 64 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 IGHV3-48P01763 117 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 APOA1P02647 267 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 Q56UQ5 140 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 GBGT1Q8N5D6 347 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 SCARB1Q8WTV0 552 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 RAB2BQ8WUD1 216 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 C21orf62Q9NYP8 219 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 FBXL17Q9UF56 701 aa10.24□□□□□ -0.77
VARS-226ENST00000483275 F11RQ9Y624 299 aaKnown RBP10.24□□□□□ -0.77
VARS-226ENST00000483275 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 DBX1A6NMT0 343 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 MARCH11A6NNE9 402 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 NDUFA4O00483 81 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 UBE2CO00762 179 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 KRASP01116 189 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 EIF4EP06730 217 aaKnown RBP10.23□□□□□ -0.77
VARS-226ENST00000483275 PRSS3P35030 304 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 G6PCP35575 357 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 HERV-K104P61576 105 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 ERVK-16P61578 105 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 PRR20EP86478 221 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 PRR20CP86479 221 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 PRR20DP86480 221 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 PRR20BP86481 221 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 PRR20AP86496 221 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 MSMO1Q15800 293 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 LAMTOR1Q6IAA8 161 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 ZBTB34Q8NCN2 500 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 OR1L8Q8NGR8 309 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 BCL7BQ9BQE9 202 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 SRSF8Q9BRL6 282 aaKnown RBP10.23□□□□□ -0.77
VARS-226ENST00000483275 PLEKHA2Q9HB19 425 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 COMMD9Q9P000 198 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 OR51B2Q9Y5P1 312 aa10.23□□□□□ -0.77
VARS-226ENST00000483275 AGRNO00468 2067 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 HPGDSO60760 199 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 GNRHRP30968 328 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 LPAR6P43657 344 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 RFX2P48378 723 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 TMBIM6P55061 237 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 FCAMRQ8WWV6 532 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 LSM10Q969L4 123 aaKnown RBP10.22□□□□□ -0.77
VARS-226ENST00000483275 GALNT14Q96FL9 552 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 AIFM2Q9BRQ8 373 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 FXYD6Q9H0Q3 95 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 NDUFA4L2Q9NRX3 87 aa10.22□□□□□ -0.77
VARS-226ENST00000483275 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 CCDC160A6NGH7 325 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 CHEK1O14757 476 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 RGS5O15539 181 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 CYB5BO43169 146 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 YIF1AO95070 293 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 PMP2P02689 132 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 CTSGP08311 255 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 ELK1P19419 428 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 SNX29P2Q8IUI4 249 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 TMEM217Q8N7C4 229 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 OR5AP2Q8NGF4 316 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 MISP3Q96FF7 219 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 RHPN1-AS1Q9BWJ2 59 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 SMPXQ9UHP9 88 aa10.21□□□□□ -0.77
VARS-226ENST00000483275 PGLYRP1O75594 196 aaPredicted RBP10.2□□□□□ -0.78
VARS-226ENST00000483275 ATF4P18848 351 aaPredicted RBP10.2□□□□□ -0.78
VARS-226ENST00000483275 TAS2R46P59540 309 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 SPCS2Q15005 226 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 TMEM116Q8NCL8 245 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 OR5H2Q8NGV7 314 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 OR11H2Q8NH07 326 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 C15orf40Q8WUR7 153 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 GIMAP1Q8WWP7 306 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 RARRES2Q99969 163 aa10.2□□□□□ -0.78
VARS-226ENST00000483275 ZNF2Q9BSG1 426 aaPredicted RBP10.2□□□□□ -0.78
VARS-226ENST00000483275 SCPEP1Q9HB40 452 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms