RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 TMEM56Q96MV1 263 aa12.31□□□□□ -0.44
RAB11FIP3-209ENST00000483002 FXYD6Q9H0Q3 95 aa12.31□□□□□ -0.44
RAB11FIP3-209ENST00000483002 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
RAB11FIP3-209ENST00000483002 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
RAB11FIP3-209ENST00000483002 DBX1A6NMT0 343 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 K7EMT4 169 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 BMI1P35226 326 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 TSPAN5P62079 268 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 CADM3Q8N126 398 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 OR5B3Q8NH48 314 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 ATP6V0BQ99437 205 aa12.3□□□□□ -0.44
RAB11FIP3-209ENST00000483002 OR4C46A6NHA9 309 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 UBE2CO00762 179 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 CTSGP08311 255 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 EWSR1Q01844 656 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 WFDC3Q8IUB2 231 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 STPG3Q8N7X2 389 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 YIPF6Q96EC8 236 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 MISP3Q96FF7 219 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
RAB11FIP3-209ENST00000483002 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 C15orf62A8K5M9 175 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 YIF1AO95070 293 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 EIF4EP06730 217 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 S100GP29377 79 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 TBC1D26Q86UD7 250 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 OR1P1Q8NH06 330 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 SMPXQ9UHP9 88 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 HYDINQ4G0P3 5121 aa12.28□□□□□ -0.44
RAB11FIP3-209ENST00000483002 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 KIR2DL5BA0A0G2JN68 375 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 KIR2DL5BA0A0G2JPC4 375 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 LY6G6CO95867 125 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TNFRSF9Q07011 255 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 H2BFWTQ7Z2G1 175 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 KIR2DL5AQ8N109 375 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 OR4A16Q8NH70 328 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 GPX8Q8TED1 209 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 RNF183Q96D59 192 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 SEC22AQ96IW7 307 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 RNF2Q99496 336 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 RHPN1-AS1Q9BWJ2 59 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 VCX3AQ9NNX9 186 aa12.27□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGKV3-7A0A075B6H7 116 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 A0A087WXM4 84 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGHV7-4-1A0A0J9YVY3 117 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TFPI2P48307 235 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 MFAP4P55083 255 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 SNX29P2Q8IUI4 249 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 APRG1Q8IVJ8 170 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TMEM116Q8NCL8 245 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 GALNT14Q96FL9 552 aa12.26□□□□□ -0.45
RAB11FIP3-209ENST00000483002 BIRC6Q9NR09 4857 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 NUPR2A6NF83 97 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 I3L2K1 104 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 CHEK1O14757 476 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 MT-CO2P00403 227 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 MRGPRFQ96AM1 343 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 ZNF414Q96IQ9 312 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 FAM212BQ9NTI7 297 aaPredicted RBP12.25□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TRAV14DV4A0A0A6YYC5 116 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 APOA1P02647 267 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 HSPE1P61604 102 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 NCS1P62166 190 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 PRCDQ00LT1 54 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 ZNF124Q15973 351 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 CEMP1Q6PRD7 247 aaPredicted RBP12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 GBGT1Q8N5D6 347 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TXN2Q99757 166 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 C6orf62Q9GZU0 229 aaPredicted RBP12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 SCPEP1Q9HB40 452 aa12.24□□□□□ -0.45
RAB11FIP3-209ENST00000483002 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 M0QYG6 137 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 GNG7O60262 68 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 ELK1P19419 428 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 FCGR2BP31994 310 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 RCVRNP35243 200 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 UCP3P55916 312 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 VBP1P61758 197 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms