RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 FAM229AH3BQW9 127 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 UPK2O00526 184 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 MYL12BO14950 172 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 CDK1P06493 297 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 NPPCP23582 126 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 GADD45AP24522 165 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 CCL18P55774 89 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 FAM3BP58499 235 aaPredicted RBP5.45□□□□□ -1.54
USP54-213ENST00000481991 DAD1P61803 113 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 ST3GAL4Q11206 333 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 DHRS2Q13268 280 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 IRF3Q14653 427 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 CLINT1Q14677 625 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 KLK9Q2XQG4 91 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 PSMG4Q5JS54 123 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 SPAG16Q8N0X2 631 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 C15orf53Q8NAA6 179 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 PINX1Q96BK5 328 aaKnown RBP5.45□□□□□ -1.54
USP54-213ENST00000481991 CENPOQ9BU64 300 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 C1QTNF4Q9BXJ3 329 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 TMEM231Q9H6L2 316 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 BET1LQ9NYM9 111 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 KLK9Q9UKQ9 250 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 OR2W1Q9Y3N9 320 aa5.45□□□□□ -1.54
USP54-213ENST00000481991 F11RQ9Y624 299 aaKnown RBP5.45□□□□□ -1.54
USP54-213ENST00000481991 IGKV1D-8A0A087WSZ0 117 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 IGKV1D-13A0A0B4J2D9 117 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 K7EIM0 57 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 SULT1C2O00338 296 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 CIB2O75838 187 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 IFNA5P01569 189 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 HLA-DQB1P01920 261 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 IGKV1-13P0DP09 117 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 BRWD1-AS2P59051 145 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 WT1-ASQ06250 92 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 TOMM20LQ6UXN7 152 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 OR1L8Q8NGR8 309 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 SECTM1Q8WVN6 248 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 TMEM203Q969S6 136 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 FAM3DQ96BQ1 224 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 SLC7A6OSQ96CW6 309 aaPredicted RBP5.44□□□□□ -1.54
USP54-213ENST00000481991 NARS2Q96I59 477 aaKnown RBP5.44□□□□□ -1.54
USP54-213ENST00000481991 OR10C1Q96KK4 312 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 C7orf50Q9BRJ6 194 aaKnown RBP5.44□□□□□ -1.54
USP54-213ENST00000481991 SRSF8Q9BRL6 282 aaKnown RBP5.44□□□□□ -1.54
USP54-213ENST00000481991 RAB22AQ9UL26 194 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 KCNK7Q9Y2U2 307 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 NSG2Q9Y328 171 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 RFNGQ9Y644 331 aa5.44□□□□□ -1.54
USP54-213ENST00000481991 TRAV2A0A0B4J234 112 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 A0A1W2PS18 150 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 FOXI3A8MTJ6 420 aaPredicted RBP5.43□□□□□ -1.54
USP54-213ENST00000481991 F5H768 121 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 K7EQG2 157 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 EREGO14944 169 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 WBP4O75554 376 aaKnown RBP5.43□□□□□ -1.54
USP54-213ENST00000481991 SNAPC5O75971 98 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 CTXN2P0C2S0 81 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 NQO2P16083 231 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 ERVK-16P61578 105 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 HES5Q5TA89 166 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 HSD17B13Q7Z5P4 300 aaPredicted RBP5.43□□□□□ -1.54
USP54-213ENST00000481991 TPRA1Q86W33 373 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 MS4A15Q8N5U1 240 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 SYT8Q8NBV8 401 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 TSPAN14Q8NG11 270 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 OR10R2Q8NGX6 335 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 ZNRF2Q8NHG8 242 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 PHYHIPQ92561 330 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 LSM10Q969L4 123 aaKnown RBP5.43□□□□□ -1.54
USP54-213ENST00000481991 TMEM230Q96A57 120 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 NXF2Q9GZY0 626 aaKnown RBP5.43□□□□□ -1.54
USP54-213ENST00000481991 CCL28Q9NRJ3 127 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 TMEM140Q9NV12 185 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 OR51B2Q9Y5P1 312 aa5.43□□□□□ -1.54
USP54-213ENST00000481991 PUS1Q9Y606 427 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP54-213ENST00000481991 TMEM272A0A1B0GTI8 110 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 TEX48A0A1B0GUV7 120 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 HELTA6NFD8 242 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 EFCAB10A6NFE3 127 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 SMIM9A6NGZ8 99 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 SLC17A2O00624 439 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 DIRAS3O95661 229 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 MT-CO2P00403 227 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 HPRT1P00492 218 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 IGLV2-14P01704 120 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 EIF2B2P49770 351 aaKnown RBP5.42□□□□□ -1.54
USP54-213ENST00000481991 XGP55808 180 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 WNT4P56705 351 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 TAS2R31P59538 309 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 SSX1Q16384 188 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 ZNF773Q6PK81 442 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 OR51H1Q8NH63 302 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 CYGBQ8WWM9 190 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 ZNF503Q96F45 646 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 TMEM56Q96MV1 263 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 ATP6V0BQ99437 205 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 TXN2Q99757 166 aa5.42□□□□□ -1.54
USP54-213ENST00000481991 C9orf16Q9BUW7 83 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms