RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 EHFQ9NZC4 300 aa6.71□□□□□ -1.34
HLA-B-253ENST00000481849 NSG2Q9Y328 171 aa6.71□□□□□ -1.34
HLA-B-253ENST00000481849 TEX50A0A1B0GTY4 177 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 OR2T8A6NH00 312 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 RBFOX2O43251 390 aaKnown RBP eCLIP6.7□□□□□ -1.34
HLA-B-253ENST00000481849 ZNF207O43670 478 aaKnown RBP6.7□□□□□ -1.34
HLA-B-253ENST00000481849 PMP2P02689 132 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 RLN1P04808 185 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 TRAPPC2P0DI81 140 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 TRAPPC2BP0DI82 140 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 VAMP1P23763 118 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 RFX2P48378 723 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 WT1-ASQ06250 92 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 MSMO1Q15800 293 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 ANKRD55Q3KP44 614 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 UBAC2Q8NBM4 344 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 OR5AP2Q8NGF4 316 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 THYN1Q9P016 225 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 UFC1Q9Y3C8 167 aa6.7□□□□□ -1.34
HLA-B-253ENST00000481849 A0A0A6YYH2 397 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 A6NJ64 397 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 TGOLN2O43493 480 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 PGLYRP1O75594 196 aaPredicted RBP6.69□□□□□ -1.34
HLA-B-253ENST00000481849 KRASP01116 189 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 RPL35AP18077 110 aaKnown RBP6.69□□□□□ -1.34
HLA-B-253ENST00000481849 PTBP1P26599 531 aaKnown RBP eCLIP6.69□□□□□ -1.34
HLA-B-253ENST00000481849 GNRHRP30968 328 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 G6PCP35575 357 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 LPAR6P43657 344 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 CBX5P45973 191 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 SCAND1P57086 179 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 ERVK-16P61578 105 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 POU2AF1Q16633 256 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 TEPPQ6URK8 271 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 SLC38A6Q8IZM9 456 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 OR2C3Q8N628 320 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 GDPD1Q8N9F7 314 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 TSPAN14Q8NG11 270 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 CD300LFQ8TDQ1 290 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 GIMAP1Q8WWP7 306 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 MARC2Q969Z3 335 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 ZNF2Q9BSG1 426 aaPredicted RBP6.69□□□□□ -1.34
HLA-B-253ENST00000481849 ZNF436Q9C0F3 470 aaPredicted RBP6.69□□□□□ -1.34
HLA-B-253ENST00000481849 PLEKHA2Q9HB19 425 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 MRPL27Q9P0M9 148 aaKnown RBP6.69□□□□□ -1.34
HLA-B-253ENST00000481849 KLK9Q9UKQ9 250 aa6.69□□□□□ -1.34
HLA-B-253ENST00000481849 ALMS1Q8TCU4 4167 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 PLECQ15149 4684 aaKnown RBP6.68□□□□□ -1.34
HLA-B-253ENST00000481849 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 MARCH11A6NNE9 402 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 CYB5BO43169 146 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 XRCC3O43542 346 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 LY6G6CO95867 125 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 SERPINE2P07093 398 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 C8orf88P0DMB2 117 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 F2RP25116 425 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 MFAP2P55001 183 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 LSM3P62310 102 aaKnown RBP6.68□□□□□ -1.34
HLA-B-253ENST00000481849 EWSR1Q01844 656 aaKnown RBP eCLIP6.68□□□□□ -1.34
HLA-B-253ENST00000481849 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 Q56UQ5 140 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 TMEM69Q5SWH9 247 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 SAMD12Q8N8I0 201 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 OR1L8Q8NGR8 309 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 OR5H2Q8NGV7 314 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 VN1R17PQ8TDU5 208 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 FCAMRQ8WWV6 532 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 S100A16Q96FQ6 103 aaKnown RBP6.68□□□□□ -1.34
HLA-B-253ENST00000481849 CHRDL1Q9BU40 450 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 YTHDF1Q9BYJ9 559 aaKnown RBP6.68□□□□□ -1.34
HLA-B-253ENST00000481849 FXYD6Q9H0Q3 95 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 C21orf62Q9NYP8 219 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 COMMD9Q9P000 198 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 OR51B2Q9Y5P1 312 aa6.68□□□□□ -1.34
HLA-B-253ENST00000481849 IGHV3-49A0A0A0MS15 119 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 SPRY2O43597 315 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 SNAPC5O75971 98 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 HLA-DMAP28067 261 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 TFPI2P48307 235 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 APOC4P55056 127 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 ELLP55199 621 aaPredicted RBP6.67□□□□□ -1.34
HLA-B-253ENST00000481849 TAS2R20P59543 309 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 PHLDA2Q53GA4 152 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 UBE2NLQ5JXB2 153 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 LYG2Q86SG7 212 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 OR5B3Q8NH48 314 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 SCARB1Q8WTV0 552 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 BORCS5Q969J3 196 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
HLA-B-253ENST00000481849 MOB3AQ96BX8 217 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 DGCR14Q96DF8 476 aaKnown RBP6.67□□□□□ -1.34
HLA-B-253ENST00000481849 SPAG8Q99932 426 aaPredicted RBP6.67□□□□□ -1.34
HLA-B-253ENST00000481849 SRSF8Q9BRL6 282 aaKnown RBP6.67□□□□□ -1.34
HLA-B-253ENST00000481849 C5orf66Q9H5L9 145 aa6.67□□□□□ -1.34
HLA-B-253ENST00000481849 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
HLA-B-253ENST00000481849 NDUFA4L2Q9NRX3 87 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms