RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 FKBP11Q9NYL4 201 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 EHFQ9NZC4 300 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 MRPL27Q9P0M9 148 aaKnown RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 F11RQ9Y624 299 aaKnown RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 TRAV18A0A075B6X5 111 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 LOC102724200A0A096LPH7 203 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 HMX3A6NHT5 357 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 C15orf61A6NNL5 157 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 C15orf62A8K5M9 175 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 PPP5D1E7EU14 171 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 CORTO00230 105 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 GPR31O00270 319 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 UPK2O00526 184 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 TSPAN4O14817 238 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 RBMXL2O75526 392 aaKnown RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 B3GALNT1O75752 331 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 SNAPC5O75971 98 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 S1PR2O95136 353 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 TNFAIP8O95379 198 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 APOA1P02647 267 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 RLN1P04808 185 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 TRAPPC2P0DI81 140 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 TRAPPC2BP0DI82 140 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 C8orf88P0DMB2 117 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 APELAP0DMC3 54 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 AREGP15514 252 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 CBLN1P23435 193 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 FCGR2BP31994 310 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 GPR183P32249 361 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 RCVRNP35243 200 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 LINC00205P59089 165 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 FXYD4P59646 89 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 RPL30P62888 115 aaKnown RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 IDNKQ5T6J7 187 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 PLET1Q6UQ28 207 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 BTNL8Q6UX41 500 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 CLEC19AQ6UXS0 136 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF818PQ6ZRF7 136 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 OR1P1Q8NH06 330 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 OR51H1Q8NH63 302 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 C15orf40Q8WUR7 153 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 AP3S1Q92572 193 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 RBMXL1Q96E39 390 aaKnown RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 S100A16Q96FQ6 103 aaKnown RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF486Q96H40 463 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 GINS3Q9BRX5 216 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 FXYD6Q9H0Q3 95 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 C21orf62Q9NYP8 219 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 CACFD1Q9UGQ2 172 aa3.11□□□□□ -1.91
VPS13D-208ENST00000481484 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
VPS13D-208ENST00000481484 FRAS1Q86XX4 4008 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 A0A087WXM4 84 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TRAV2A0A0B4J234 112 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 PIGBOS1A0A0B4J2F0 54 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 A0A1B0GW64 132 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF320A2RRD8 509 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SMIM30A4D0T7 59 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 IZUMO1RA6ND01 250 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 RBMY1BA6NDE4 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 RBMY1EA6NEQ0 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 MFSD2BA6NFX1 497 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF785A8K8V0 405 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ANKRD65E5RJM6 399 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 K7EMT4 169 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SULT1C2O00338 296 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 NUPL2O15504 423 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TNFSF12O43508 249 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 PRH1P02810 166 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 EIF4EP06730 217 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SERPINE2P07093 398 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 CD7P09564 240 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 RBMY1DP0C7P1 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 PRSS3P35030 304 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 NUP62P37198 522 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 UCP3P55916 312 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TAS2R20P59543 309 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 PRCDQ00LT1 54 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 MXD1Q05195 221 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TNFRSF9Q07011 255 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 NEDD8Q15843 81 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TM4SF20Q53R12 229 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM41BQ5BJD5 291 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ZFAND6Q6FIF0 208 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ADAMTSL5Q6ZMM2 481 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SSX9Q7RTT3 188 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 VKORC1L1Q8N0U8 176 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 LILRB2Q8N423 598 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ARRDC1Q8N5I2 433 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 OR2C3Q8N628 320 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 DEFB125Q8N687 156 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 GVQW1Q8N7I0 195 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SAMD12Q8N8I0 201 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 UXS1Q8NBZ7 420 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 GATAD1Q8WUU5 269 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SLC25A46Q96AG3 418 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 DGCR14Q96DF8 476 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 GALNT14Q96FL9 552 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 NARS2Q96I59 477 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TXN2Q99757 166 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms