RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 OR4X2Q8NGF9 303 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 J3QLI3 93 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 MSMBP08118 114 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 UBE2E1P51965 193 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 MEF2BQ02080 365 aaPredicted RBP15.81■□□□□ 0.12
CCM2-214ENST00000481194 WDR73Q6P4I2 378 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 OR10G8Q8NGN5 311 aa15.81■□□□□ 0.12
CCM2-214ENST00000481194 IGHV2-70DA0A0C4DH43 119 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 FOXI3A8MTJ6 420 aaPredicted RBP15.8■□□□□ 0.12
CCM2-214ENST00000481194 SMIM17P0DL12 118 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 SH3BGRL3Q9H299 93 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 JKAMPQ9P055 326 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 FUT9Q9Y231 359 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 GOLGB1Q14789 3259 aaKnown RBP15.8■□□□□ 0.12
CCM2-214ENST00000481194 SLC31A2O15432 143 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 TMEM190Q8WZ59 177 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 MARVELD3Q96A59 401 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 PVRIGQ6DKI7 326 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 C8orf31Q8N9H6 132 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 CLRN3Q8NCR9 226 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 LOXP28300 417 aaPredicted RBP15.8■□□□□ 0.12
CCM2-214ENST00000481194 FCGR2BP31994 310 aaPredicted RBP15.8■□□□□ 0.12
CCM2-214ENST00000481194 C2orf83Q53S99 150 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 SSX7Q7RTT5 188 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 CLDND2Q8NHS1 167 aa15.8■□□□□ 0.12
CCM2-214ENST00000481194 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.79■□□□□ 0.12
CCM2-214ENST00000481194 C11orf53Q8IXP5 236 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 IGKV1-6A0A0C4DH72 117 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 SIAH2O43255 324 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 VDAC2P45880 294 aaPredicted RBP15.79■□□□□ 0.12
CCM2-214ENST00000481194 ZNF383Q8NA42 475 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 OTOGLQ3ZCN5 2332 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 AP4M1O00189 453 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 LHBP01229 141 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 SAMD13Q5VXD3 122 aa15.79■□□□□ 0.12
CCM2-214ENST00000481194 P01737 135 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 RANP62826 216 aaKnown RBP15.78■□□□□ 0.12
CCM2-214ENST00000481194 SERTM2A0A1B0GWG4 89 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 RBPMS2Q6ZRY4 209 aaKnown RBP15.78■□□□□ 0.12
CCM2-214ENST00000481194 OR1P1Q8NH06 330 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 FAM74A7A6NL05 159 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 CCKARP32238 428 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 MEOX2P50222 304 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 KLRD1Q13241 179 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 C17orf58Q2M2W7 97 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 BIVMQ86UB2 503 aa15.78■□□□□ 0.12
CCM2-214ENST00000481194 IGKV1-5P01602 117 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 IGHV2-70P01814 119 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 ARL14EPLP0DKL9 152 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 ZNF833PQ6ZTB9 187 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 C16orf92Q96LL3 132 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 IL4P05112 153 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 SUMO1P63165 101 aaKnown RBP15.77■□□□□ 0.12
CCM2-214ENST00000481194 CD69Q07108 199 aa15.77■□□□□ 0.12
CCM2-214ENST00000481194 H3BQ15 152 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 AWAT1Q58HT5 328 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 Q5PR19 223 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 LINC00052Q96N35 136 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 LY6HO94772 140 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 GRNP28799 593 aaKnown RBP15.77■□□□□ 0.11
CCM2-214ENST00000481194 C1orf122Q6ZSJ8 110 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 OR10J6PQ8NGY7 276 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 GPR82Q96P67 336 aa15.77■□□□□ 0.11
CCM2-214ENST00000481194 LINC00473A8K010 186 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 C15orf65H3BRN8 121 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 EBLN2Q6P2I7 272 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 LYPD6Q86Y78 171 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 IGFBP2P18065 325 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 RPL29P47914 159 aaKnown RBP15.76■□□□□ 0.11
CCM2-214ENST00000481194 GCHFRP30047 84 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 FABP9Q0Z7S8 132 aa15.76■□□□□ 0.11
CCM2-214ENST00000481194 H0YIZ8 118 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 C1QL1O75973 258 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 MFSD2BA6NFX1 497 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 C5orf64Q2M2E5 130 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 RELBQ01201 579 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 TFF3Q07654 80 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 LINC00305Q7Z4B0 112 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 GBGT1Q8N5D6 347 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 LHFPL5Q8TAF8 219 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 TMEM78Q5T7P6 136 aa15.75■□□□□ 0.11
CCM2-214ENST00000481194 CEP250Q9BV73 2442 aa15.74■□□□□ 0.11
CCM2-214ENST00000481194 COL8A1P27658 744 aa15.74■□□□□ 0.11
CCM2-214ENST00000481194 IFITM2Q01629 132 aa15.74■□□□□ 0.11
CCM2-214ENST00000481194 SOD3P08294 240 aa15.74■□□□□ 0.11
CCM2-214ENST00000481194 TPRP12270 2363 aaKnown RBP15.74■□□□□ 0.11
CCM2-214ENST00000481194 LYL1P12980 280 aa15.74■□□□□ 0.11
CCM2-214ENST00000481194 RCC1LQ96I51 464 aaKnown RBP15.74■□□□□ 0.11
CCM2-214ENST00000481194 RAB5AP20339 215 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 PRB3Q04118 309 aaPredicted RBP15.73■□□□□ 0.11
CCM2-214ENST00000481194 TRAPPC1Q9Y5R8 145 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 HEATR1Q9H583 2144 aaKnown RBP15.73■□□□□ 0.11
CCM2-214ENST00000481194 TCRBV4S1A1TA0A5B7 111 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 ZNF506Q5JVG8 444 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 TMEM88Q6PEY1 159 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 FGF23Q9GZV9 251 aaPredicted RBP15.73■□□□□ 0.11
CCM2-214ENST00000481194 RPRMQ9NS64 109 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 TRAV41A0A0B4J266 112 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 PGPA6NDG6 321 aa15.73■□□□□ 0.11
CCM2-214ENST00000481194 WDR83OSQ9Y284 106 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms