RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-210	ENST00000480956	MND1	Q9BWT6	205 aa		5.78	□□□□□ -1.48
LSM5-210	ENST00000480956	KRTAP4-5	Q9BYR2	181 aa		5.78	□□□□□ -1.48
LSM5-210	ENST00000480956	OR2H1	Q9GZK4	316 aa		5.78	□□□□□ -1.48
LSM5-210	ENST00000480956	WDR61	Q9GZS3	305 aa	Known RBP	5.78	□□□□□ -1.48
LSM5-210	ENST00000480956	MED31	Q9Y3C7	131 aa		5.78	□□□□□ -1.48
LSM5-210	ENST00000480956	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.78	□□□□□ -1.48
LSM5-210	ENST00000480956	TRBV20OR9-2	A0A075B6H5	130 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	C9orf170	A2RU37	121 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	TRAF3IP2	O43734	574 aa	Predicted RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	SCO1	O75880	301 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	CXorf1	O96002	111 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	SRI	P30626	198 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	HIST1H1A	Q02539	215 aa	Predicted RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	TNFAIP8L3	Q5GJ75	292 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	PRSS54	Q6PEW0	395 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	CROCCP2	Q86T23	111 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	ORMDL3	Q8N138	153 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	C2orf15	Q8WU43	125 aa	Known RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	RAB2B	Q8WUD1	216 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	COA4	Q9NYJ1	87 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	GNG8	Q9UK08	70 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956		A0A1B0GUL6	1792 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	SCN5A	Q14524	2016 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	LOC102725191	A0A1B0GVB3	256 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	IFITM10	A6NMD0	228 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956		C9JAW5	83 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	IGKV1-39	P01597	117 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	IGKV1D-39	P04432	117 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	TSPAN19	P0C672	248 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	EVX1	P49640	407 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	ELF3	P78545	371 aa	Predicted RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	HNRNPA0	Q13151	305 aa	Known RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	ENDOG	Q14249	297 aa	Known RBP	5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	WDR86	Q86TI4	376 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	SGMS2	Q8NHU3	365 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	TRIB3	Q96RU7	358 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	KRTAP9-8	Q9BYQ0	159 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	SMIM3	Q9BZL3	60 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	IMUP	Q9GZP8	106 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	HIGD1A	Q9Y241	93 aa		5.77	□□□□□ -1.49
LSM5-210	ENST00000480956	QSER1	Q2KHR3	1735 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	TRAV9-1	A0A075B6T8	112 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	EVI2A	P22794	236 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	LPAR6	P43657	344 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	ZNF136	P52737	540 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	NANOS2	P60321	138 aa	Known RBP	5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	HBA1	P69905	142 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	HOXC5	Q00444	222 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	PLCXD2	Q0VAA5	305 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	RNASE10	Q5GAN6	216 aa	Known RBP	5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	AWAT2	Q6E213	333 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	OR8I2	Q8N0Y5	310 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	KLHL30-AS1	Q8NEE0	82 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	PRSS21	Q9Y6M0	314 aa		5.76	□□□□□ -1.49
LSM5-210	ENST00000480956	NKX2-6	A6NCS4	301 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956		M0R2Z0	102 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	NUDT2	P50583	147 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	KIAA0040	Q15053	153 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	PDGFRL	Q15198	375 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	HRCT1	Q6UXD1	115 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	ZNF440	Q8IYI8	595 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	OR8A1	Q8NGG7	326 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	ISOC1	Q96CN7	298 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	LYZL4	Q96KX0	146 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	OR2J1	Q9GZK6	312 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	C8orf17	Q9NRJ1	99 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.75	□□□□□ -1.49
LSM5-210	ENST00000480956	RIC1	Q4ADV7	1423 aa		5.75	□□□□□ -1.49
LSM5-210	ENST00000480956		A0A087WUU8	490 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	IGKV1-6	A0A0C4DH72	117 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	DPRX	A6NFQ7	191 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	BCL2	P10415	239 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	CCR2	P41597	374 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	SELENOW	P63302	87 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	LYRM7	Q5U5X0	104 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	OR10D4P	Q8NGN7	298 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	LMX1A	Q8TE12	382 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	LXN	Q9BS40	222 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	SDF2L1	Q9HCN8	221 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	PCTP	Q9UKL6	214 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	ERG28	Q9UKR5	140 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	MRPS16	Q9Y3D3	137 aa	Known RBP	5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	DOCK6	Q96HP0	2047 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	OR2H2	O95918	312 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	IGHV3-13	P01766	116 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	SCT	P09683	121 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	ZNF705D	P0CH99	300 aa	Predicted RBP	5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	WNT4	P56705	351 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	FKBP1A	P62942	108 aa	Known RBP	5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	FKBP1C	Q5VVH2	108 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	ARL11	Q969Q4	196 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	C14orf144	Q96I85	54 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	ZNF414	Q96IQ9	312 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	TP53RK	Q96S44	253 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	SPIN2A	Q99865	258 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	OPRPN	Q99935	248 aa	Predicted RBP	5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	SPIN2B	Q9BPZ2	258 aa		5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.74	□□□□□ -1.49
LSM5-210	ENST00000480956	HEY1	Q9Y5J3	304 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms