RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 NOL3O60936 208 aaKnown RBP11.39□□□□□ -0.59
LIMS3-203ENST00000480744 FGF2P09038 288 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 C8orf88P0DMB2 117 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 HLA-DMAP28067 261 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 PRSS3P35030 304 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 SLC38A6Q8IZM9 456 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 UBAC2Q8NBM4 344 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 OR6F1Q8NGZ6 308 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 GPX8Q8TED1 209 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 TMEM190Q8WZ59 177 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
LIMS3-203ENST00000480744 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 EXTL2Q9UBQ6 330 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 UBQLN2Q9UHD9 624 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 F11RQ9Y624 299 aaKnown RBP11.39□□□□□ -0.59
LIMS3-203ENST00000480744 IGHV3OR16-8A0A075B7F1 116 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 NAT1P18440 290 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 HRH1P35367 487 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 MFAP2P55001 183 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 Q56UQ5 140 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 RNASE12Q5GAN4 147 aaKnown RBP11.38□□□□□ -0.59
LIMS3-203ENST00000480744 OR2C3Q8N628 320 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 BSCL2Q96G97 398 aaPredicted RBP11.38□□□□□ -0.59
LIMS3-203ENST00000480744 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 C21orf62Q9NYP8 219 aa11.38□□□□□ -0.59
LIMS3-203ENST00000480744 CCDC160A6NGH7 325 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 ZNF207O43670 478 aaKnown RBP11.37□□□□□ -0.59
LIMS3-203ENST00000480744 TSPAN5P62079 268 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 SCARB1Q8WTV0 552 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 TMEM56Q96MV1 263 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 ABHD1Q96SE0 405 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
LIMS3-203ENST00000480744 OVOL2Q9BRP0 275 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 CHRDL1Q9BU40 450 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 NXF2Q9GZY0 626 aaKnown RBP11.37□□□□□ -0.59
LIMS3-203ENST00000480744 C5orf66Q9H5L9 145 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 DAZ1Q9NQZ3 744 aaKnown RBP11.37□□□□□ -0.59
LIMS3-203ENST00000480744 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
LIMS3-203ENST00000480744 PLECQ15149 4684 aaKnown RBP11.36□□□□□ -0.59
LIMS3-203ENST00000480744 NDUFA4O00483 81 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 RGS5O15539 181 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 S100GP29377 79 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 LAMTOR1Q6IAA8 161 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 SPSB3Q6PJ21 355 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 LYSMD2Q8IV50 215 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 FKBP11Q9NYL4 201 aa11.36□□□□□ -0.59
LIMS3-203ENST00000480744 RSL24D1Q9UHA3 163 aaKnown RBP11.36□□□□□ -0.59
LIMS3-203ENST00000480744 SMIM31A0A1B0GVY4 71 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 DBX1A6NMT0 343 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 K7EIM0 57 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 TSPAN4O14817 238 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 APOC4P55056 127 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 OR5B3Q8NH48 314 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 OR52I2Q8NH67 350 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 MISP3Q96FF7 219 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 TSC22D3Q99576 134 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 C6orf62Q9GZU0 229 aaPredicted RBP11.35□□□□□ -0.59
LIMS3-203ENST00000480744 SCPEP1Q9HB40 452 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
LIMS3-203ENST00000480744 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
LIMS3-203ENST00000480744 ZNF701M0R085 212 aaPredicted RBP11.34□□□□□ -0.59
LIMS3-203ENST00000480744 ADMP35318 185 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 DEFB135Q30KP9 77 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 LPCAT3Q6P1A2 487 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 TBC1D26Q86UD7 250 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 MCFD2Q8NI22 146 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 KLK11Q9UBX7 282 aa11.34□□□□□ -0.59
LIMS3-203ENST00000480744 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 YIF1AO95070 293 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 CTSDP07339 412 aaPredicted RBP11.33□□□□□ -0.6
LIMS3-203ENST00000480744 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
LIMS3-203ENST00000480744 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 CADM3Q8N126 398 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 BIRC6Q9NR09 4857 aa11.33□□□□□ -0.6
LIMS3-203ENST00000480744 IGHV3-49A0A0A0MS15 119 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 A0A0J9YWU9 116 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 K7EMT4 169 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 NUPL2O15504 423 aaKnown RBP11.32□□□□□ -0.6
LIMS3-203ENST00000480744 SPRY2O43597 315 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 TNFSF8P32971 234 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 RCVRNP35243 200 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 MRGPRFQ96AM1 343 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 DIRAS2Q96HU8 199 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 SOSTQ9BQB4 213 aa11.32□□□□□ -0.6
LIMS3-203ENST00000480744 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 M0QYG6 137 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 IGHV3-48P01763 117 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 CTSGP08311 255 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 TFPI2P48307 235 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 MFAP4P55083 255 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms