RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SPAG8Q99932 426 aaPredicted RBP8.65□□□□□ -1.02
CCM2-213ENST00000480658 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 PLEKHA3Q9HB20 300 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 COPZ2Q9P299 210 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 EXTL2Q9UBQ6 330 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 MTFP1Q9UDX5 166 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 TRAV3A0A0B4J244 114 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 GABARAPH6UMI1 98 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 K7EMT4 169 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 RGS5O15539 181 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 HLA-AP01891 365 aaKnown RBP8.64□□□□□ -1.03
CCM2-213ENST00000480658 C8orf88P0DMB2 117 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 PGAM2P15259 253 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 AKR1C2P52895 323 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 CMC4P56277 68 aaPredicted RBP8.64□□□□□ -1.03
CCM2-213ENST00000480658 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
CCM2-213ENST00000480658 ZNF585BQ52M93 769 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 FAM219AQ8IW50 185 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 UXS1Q8NBZ7 420 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 FAM110AQ9BQ89 295 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 DNAH9Q9NYC9 4486 aa8.64□□□□□ -1.03
CCM2-213ENST00000480658 STAB2Q8WWQ8 2551 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 OR4C46A6NHA9 309 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 INS-IGF2F8WCM5 200 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 SNCAP37840 140 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 PIGPP57054 158 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 HSPE1P61604 102 aaKnown RBP8.63□□□□□ -1.03
CCM2-213ENST00000480658 Q56UQ5 140 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 LHFPL1Q86WI0 220 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 TMEM61Q8N0U2 210 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 SLC35G3Q8N808 338 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 TMEM229BQ8NBD8 167 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 OR10W1Q8NGF6 305 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 TERB2Q8NHR7 220 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 RRNAD1Q96FB5 475 aaKnown RBP8.63□□□□□ -1.03
CCM2-213ENST00000480658 SEC22AQ96IW7 307 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 SCGB3A2Q96PL1 93 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 GINS3Q9BRX5 216 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 C6orf62Q9GZU0 229 aaPredicted RBP8.63□□□□□ -1.03
CCM2-213ENST00000480658 SRD5A3Q9H8P0 318 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
CCM2-213ENST00000480658 C14orf166Q9Y224 244 aaKnown RBP8.63□□□□□ -1.03
CCM2-213ENST00000480658 C3orf85A0A1B0GTC6 90 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 IZUMO1RA6ND01 250 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 TSPAN4O14817 238 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 NPBWR1P48145 328 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 APOC4P55056 127 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 TMBIM6P55061 237 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 MFAP4P55083 255 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 BTNL8Q6UX41 500 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
CCM2-213ENST00000480658 C19orf35Q6ZS72 473 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 UBAC2Q8NBM4 344 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 RNASE11Q8TAA1 199 aaKnown RBP8.62□□□□□ -1.03
CCM2-213ENST00000480658 SCARB1Q8WTV0 552 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 MRGPRFQ96AM1 343 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 WDR89Q96FK6 387 aaPredicted RBP8.62□□□□□ -1.03
CCM2-213ENST00000480658 PRRT1Q99946 306 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 TMEM231Q9H6L2 316 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 EDA2RQ9HAV5 297 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 CCDC59Q9P031 241 aaKnown RBP8.62□□□□□ -1.03
CCM2-213ENST00000480658 MLXQ9UH92 298 aa8.62□□□□□ -1.03
CCM2-213ENST00000480658 LOC102724200A0A096LPH7 203 aaPredicted RBP8.61□□□□□ -1.03
CCM2-213ENST00000480658 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 UBE2CO00762 179 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 CTDSPLO15194 276 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 GNG7O60262 68 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 RAB3DO95716 219 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 CD74P04233 296 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 CD3DP04234 171 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 PAFAH1B2P68402 229 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 OR52I2Q8NH67 350 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 ABHD1Q96SE0 405 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 KLK11Q9UBX7 282 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 RSL24D1Q9UHA3 163 aaKnown RBP8.61□□□□□ -1.03
CCM2-213ENST00000480658 NSG2Q9Y328 171 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 S4R3C0 116 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 TNCP24821 2201 aa8.61□□□□□ -1.03
CCM2-213ENST00000480658 K7EIM0 57 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 M0QYG6 137 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 IFNA17P01571 189 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 CTSDP07339 412 aaPredicted RBP8.6□□□□□ -1.03
CCM2-213ENST00000480658 CD7P09564 240 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 AKAIN1P0CW23 69 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 SMIM18P0DKX4 95 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 DHODHQ02127 395 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 SCGB2B2Q4G0G5 96 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 TM4SF20Q53R12 229 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 UNQ9165/PRO28630Q6UXU0 137 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 NOXA1Q86UR1 476 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 DUSP18Q8NEJ0 188 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms