RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 PPIAL4CA0A0B4J2A2 164 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 PGPA6NDG6 321 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 H3BVH4 76 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 LILRA1O75019 489 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 PPIAL4GP0DN37 164 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 GCSHP23434 173 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 BSPH1Q075Z2 132 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 DOCK10Q96BY6 2186 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 F2RL2O00254 374 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 TM4SF5O14894 197 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 HEPN1Q6WQI6 88 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 ASCL4Q6XD76 172 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 IMMP2LQ96T52 175 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 PLSCR4Q9NRQ2 329 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 GFRA3O60609 400 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 C5orf24Q7Z6I8 188 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
COL20A1-206ENST00000479501 LINC01560Q8TB33 94 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 ZNF430Q9H8G1 570 aaPredicted RBP11.99□□□□□ -0.49
COL20A1-206ENST00000479501 CD5P06127 495 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 HERVK_113P61574 105 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 JOSD1Q15040 202 aaPredicted RBP11.99□□□□□ -0.49
COL20A1-206ENST00000479501 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
COL20A1-206ENST00000479501 TNFRSF19Q9NS68 423 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 TBL2Q9Y4P3 447 aaKnown RBP11.99□□□□□ -0.49
COL20A1-206ENST00000479501 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
COL20A1-206ENST00000479501 C17orf100A8MU93 164 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 PSPNO60542 156 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 YPEL1O60688 119 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 ATP5IP56385 69 aaPredicted RBP11.98□□□□□ -0.49
COL20A1-206ENST00000479501 YPEL2Q96QA6 119 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 SSBP3Q9BWW4 388 aaPredicted RBP11.98□□□□□ -0.49
COL20A1-206ENST00000479501 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 SHANK1Q9Y566 2161 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 RAMP3O60896 148 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 C8orf88P0DMB2 117 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 ARF6P62330 175 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 DNM1P46Q6ZS02 220 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 NABP2Q9BQ15 211 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 LPAR2Q9HBW0 351 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 RNFT1Q5M7Z0 435 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 STPG3Q8N7X2 389 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
COL20A1-206ENST00000479501 SLC17A3O00476 420 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 OR5R1Q8NH85 324 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 PGLYRP4Q96LB8 373 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 MIEN1Q9BRT3 115 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 HIGD1AQ9Y241 93 aa11.98□□□□□ -0.49
COL20A1-206ENST00000479501 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
COL20A1-206ENST00000479501 TFF3Q07654 80 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 ICAM4Q14773 271 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 MORN2Q502X0 79 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 MED13LQ71F56 2210 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 SRSF6Q13247 344 aaKnown RBP11.97□□□□□ -0.49
COL20A1-206ENST00000479501 RSPO1Q2MKA7 263 aaPredicted RBP11.97□□□□□ -0.49
COL20A1-206ENST00000479501 TMEM177Q53S58 311 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 CENPWQ5EE01 88 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 CREBBPQ92793 2442 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 BTF3P20290 206 aaKnown RBP11.97□□□□□ -0.49
COL20A1-206ENST00000479501 GCHFRP30047 84 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 HOXA4Q00056 320 aaPredicted RBP11.97□□□□□ -0.49
COL20A1-206ENST00000479501 TMEM171Q8WVE6 324 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 CLEC7AQ9BXN2 247 aa11.97□□□□□ -0.49
COL20A1-206ENST00000479501 NUDT3O95989 172 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 DLX1P56177 255 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 NPIPB3Q92617 1050 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 SGK494Q96LW2 274 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 CKS2P33552 79 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
COL20A1-206ENST00000479501 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.49
COL20A1-206ENST00000479501 CCL20P78556 96 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.49
COL20A1-206ENST00000479501 PEAR1Q5VY43 1037 aaPredicted RBP11.96□□□□□ -0.49
COL20A1-206ENST00000479501 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 ZCCHC24Q8N2G6 241 aaKnown RBP11.96□□□□□ -0.49
COL20A1-206ENST00000479501 SMIM12Q96EX1 92 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 COL4A3Q01955 1670 aa11.96□□□□□ -0.49
COL20A1-206ENST00000479501 SRRM5B3KS81 715 aa11.96□□□□□ -0.5
COL20A1-206ENST00000479501 GFI1BQ5VTD9 330 aa11.96□□□□□ -0.5
COL20A1-206ENST00000479501 PEF1Q9UBV8 284 aaKnown RBP11.96□□□□□ -0.5
COL20A1-206ENST00000479501 LINC00312Q9Y6C7 94 aa11.96□□□□□ -0.5
COL20A1-206ENST00000479501 NMSQ5H8A3 153 aa11.96□□□□□ -0.5
COL20A1-206ENST00000479501 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.5
COL20A1-206ENST00000479501 C19orf24Q9BVV8 132 aa11.96□□□□□ -0.5
COL20A1-206ENST00000479501 RRHO14718 337 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 IGHG3P01860 377 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 REG1AP05451 166 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 CD55P08174 381 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 HSPB7Q9UBY9 170 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
COL20A1-206ENST00000479501 USF3Q68DE3 2245 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms