RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 HBA1P69905 142 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 ZNF345Q14585 488 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 HIST2H2BEQ16778 126 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.02□□□□□ -2.25
CLOCK-204ENST00000479384 RPL22L1Q6P5R6 122 aaKnown RBP1.02□□□□□ -2.25
CLOCK-204ENST00000479384 AAED1Q7RTV5 226 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 LRRC25Q8N386 305 aaPredicted RBP1.02□□□□□ -2.25
CLOCK-204ENST00000479384 C9orf163Q8N9P6 203 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 C10orf105Q8TEF2 133 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 C11orf40Q8WZ69 217 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 HIST1H2BHQ93079 126 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 HIST1H2BNQ99877 126 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 HIST1H2BMQ99879 126 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 ADAT1Q9BUB4 502 aaKnown RBP1.02□□□□□ -2.25
CLOCK-204ENST00000479384 DERL1Q9BUN8 251 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 PARD6GQ9BYG4 376 aaPredicted RBP1.02□□□□□ -2.25
CLOCK-204ENST00000479384 YIPF3Q9GZM5 350 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 COMMD5Q9GZQ3 224 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 PRTFDC1Q9NRG1 225 aa1.02□□□□□ -2.25
CLOCK-204ENST00000479384 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
CLOCK-204ENST00000479384 SMARCA4P51532 1647 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 TTC21AQ8NDW8 1320 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 OMPP47874 163 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 ZNF80P51504 273 aaPredicted RBP1.01□□□□□ -2.25
CLOCK-204ENST00000479384 CEBPGP53567 150 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 STX5Q13190 355 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 ITGB3BPQ13352 177 aaPredicted RBP1.01□□□□□ -2.25
CLOCK-204ENST00000479384 CDK5R1Q15078 307 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 KISS1Q15726 138 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 SPANXN3Q5MJ09 141 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 SPOPLQ6IQ16 392 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 ANKRD29Q8N6D5 301 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 WFDC11Q8NEX6 87 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 RASSF5Q8WWW0 418 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 TMEM106AQ96A25 262 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 DCUN1D1Q96GG9 259 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 CCDC42Q96M95 316 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 PPP1R2P1Q96PQ5 205 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 SCGB3A1Q96QR1 104 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 VPS29Q9UBQ0 182 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 PKIGQ9Y2B9 76 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 LHFPL6Q9Y693 200 aa1.01□□□□□ -2.25
CLOCK-204ENST00000479384 PRRC2BQ5JSZ5 2229 aaKnown RBP1.01□□□□□ -2.25
CLOCK-204ENST00000479384 GLI3P10071 1580 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 RTTNQ86VV8 2226 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 SETD5Q9C0A6 1442 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 TONSLQ96HA7 1378 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 CCDC88CQ9P219 2028 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 TMEM212A6NML5 194 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 CHP2O43745 196 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 MRPS14O60783 128 aaKnown RBP1□□□□□ -2.25
CLOCK-204ENST00000479384 IGKV1-5P01602 117 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 HIST1H1TP22492 207 aaPredicted RBP1□□□□□ -2.25
CLOCK-204ENST00000479384 RPL5P46777 297 aaKnown RBP1□□□□□ -2.25
CLOCK-204ENST00000479384 RUNX1Q01196 453 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 KCNJ8Q15842 424 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 ACOT6Q3I5F7 207 aaPredicted RBP1□□□□□ -2.25
CLOCK-204ENST00000479384 LPCAT3Q6P1A2 487 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 UNQ6190/PRO20217Q6UXQ8 127 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 BPIFA4PQ86YQ2 179 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 TRAPPC5Q8IUR0 188 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 OR13C4Q8NGS5 318 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 GINS4Q9BRT9 223 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 ULBP3Q9BZM4 244 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 MED9Q9NWA0 146 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 FBXL12Q9NXK8 326 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 CKLFQ9UBR5 152 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 RALGAPA2Q2PPJ7 1873 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 SDK1Q7Z5N4 2213 aa1□□□□□ -2.25
CLOCK-204ENST00000479384 RP1L1Q8IWN7 2480 aaPredicted RBP0.99□□□□□ -2.25
CLOCK-204ENST00000479384 MAST2Q6P0Q8 1798 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 IGKV3-7A0A075B6H7 116 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 IGKV1D-43A0A0B4J1Z2 117 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 DPRXA6NFQ7 191 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 CLDN24A6NM45 220 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 GOLGA6L19H0YKK7 550 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 FAAHO00519 579 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 RPP14O95059 124 aaKnown RBP0.99□□□□□ -2.25
CLOCK-204ENST00000479384 LYPLA2O95372 231 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 CRYZL1O95825 349 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 SERPINA6P08185 405 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 RPS17P08708 135 aaKnown RBP0.99□□□□□ -2.25
CLOCK-204ENST00000479384 IL9P15248 144 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 DEFA1P59665 94 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 SURF2Q15527 256 aaPredicted RBP0.99□□□□□ -2.25
CLOCK-204ENST00000479384 LCN15Q6UWW0 184 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 LINC00471Q8N535 108 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 CLDN22Q8N7P3 220 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 ZNF439Q8NDP4 499 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 OR8J2Q8NGG1 315 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 DNAJC9Q8WXX5 260 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 NIPSNAP1Q9BPW8 284 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 C11orf68Q9H3H3 251 aaKnown RBP0.99□□□□□ -2.25
CLOCK-204ENST00000479384 TP73-AS1Q9UF72 201 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 TMEM56-RWDD3S4R434 201 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 MYH11P35749 1972 aa0.99□□□□□ -2.25
CLOCK-204ENST00000479384 WRNQ14191 1432 aaPredicted RBP eCLIP0.98□□□□□ -2.25
CLOCK-204ENST00000479384 MTUS2Q5JR59 1369 aa0.98□□□□□ -2.25
CLOCK-204ENST00000479384 TRAV9-1A0A075B6T8 112 aa0.98□□□□□ -2.25
CLOCK-204ENST00000479384 EXOC1LA0A1B0GW35 172 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms