RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 RBKSQ9H477 322 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 TMEM160Q9NX00 188 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 METTL1Q9UBP6 276 aaKnown RBP5.28□□□□□ -1.56
USP48-208ENST00000479177 CACFD1Q9UGQ2 172 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 TCF19Q9Y242 345 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 ZNF257Q9Y2Q1 563 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 C2CD3Q4AC94 2353 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 A0A1B0GW64 132 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 RNF222A6NCQ9 220 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 A6NDX4 124 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 CGB1A6NKQ9 187 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 HMSDA8MTL9 139 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 CEBPZOSA8MTT3 80 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 WRBO00258 174 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 SYNGR2O43760 224 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 MED6O75586 246 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 OR2F2O95006 317 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 CA2P00918 260 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 IAPPP10997 89 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 GYPEP15421 78 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 MAS1LP35410 378 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 VDAC2P45880 294 aaPredicted RBP5.27□□□□□ -1.57
USP48-208ENST00000479177 COMPP49747 757 aaPredicted RBP5.27□□□□□ -1.57
USP48-208ENST00000479177 EIF2B2P49770 351 aaKnown RBP5.27□□□□□ -1.57
USP48-208ENST00000479177 SPCS3P61009 180 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 HSPE1P61604 102 aaKnown RBP5.27□□□□□ -1.57
USP48-208ENST00000479177 NDPQ00604 133 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 PRCDQ00LT1 54 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 C19orf54Q5BKX5 351 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 SPINK9Q5DT21 86 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 TMEM65Q6PI78 240 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 PPP1R27Q86WC6 154 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 TMEM219Q86XT9 240 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 MMD2Q8IY49 270 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 C9orf62Q8N4C0 152 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 Q8N9W7 124 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 OR1L8Q8NGR8 309 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 C22orf15Q8WYQ4 148 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 DCUN1D4Q92564 292 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 HYLS1Q96M11 299 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 RBM14Q96PK6 669 aaKnown RBP5.27□□□□□ -1.57
USP48-208ENST00000479177 RAB40CQ96S21 281 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 SSX3Q99909 188 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 SMR3AQ99954 134 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 SLC25A33Q9BSK2 321 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 PRDM13Q9H4Q3 707 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 LYRM2Q9NU23 88 aaPredicted RBP5.27□□□□□ -1.57
USP48-208ENST00000479177 FKBP11Q9NYL4 201 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 KIAA1456Q9P272 454 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 TNFSF18Q9UNG2 199 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 MOB4Q9Y3A3 225 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 OR51B2Q9Y5P1 312 aa5.27□□□□□ -1.57
USP48-208ENST00000479177 NIPBLQ6KC79 2804 aaeCLIP5.26□□□□□ -1.57
USP48-208ENST00000479177 TEX50A0A1B0GTY4 177 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 MSGN1A6NI15 193 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 NCBP2LA6PVI3 153 aaKnown RBP5.26□□□□□ -1.57
USP48-208ENST00000479177 E5RGE8 158 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 INS-IGF2F8WCM5 200 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 L7N2F9 121 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 FCN1O00602 326 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 ARPC5O15511 151 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 FGF16O43320 207 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 CHST1O43916 411 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 GPR137BO60478 399 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 TSC22D2O75157 780 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 LY6G6DO95868 133 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 IFNA17P01571 189 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 IGHV4-59P01825 116 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 HLA-DRB1P01911 266 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 RLN2P04090 185 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 CD99P14209 185 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 CXCL2P19875 107 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 PVALBP20472 110 aaPredicted RBP5.26□□□□□ -1.57
USP48-208ENST00000479177 HNF1AP20823 631 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 SRP14P37108 136 aaKnown RBP5.26□□□□□ -1.57
USP48-208ENST00000479177 IER3P46695 156 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 RPL27AP46776 148 aaKnown RBP5.26□□□□□ -1.57
USP48-208ENST00000479177 P2RY1P47900 373 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 HOXA1P49639 335 aaPredicted RBP5.26□□□□□ -1.57
USP48-208ENST00000479177 PAX9P55771 341 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 TAS2R30P59541 319 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 GNB1P62873 340 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 VAMP2P63027 116 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 ZNF345Q14585 488 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 PLGLAQ15195 96 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 TNXAQ16473 311 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 LY6EQ16553 131 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 LAMTOR1Q6IAA8 161 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 Q6YL49 198 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 ZNF546Q86UE3 836 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 C5orf56Q8N8D9 126 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 OR5R1Q8NH85 324 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 DTD1Q8TEA8 209 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 SMIM8Q96KF7 97 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 AQP10Q96PS8 301 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 CIB3Q96Q77 187 aaPredicted RBP5.26□□□□□ -1.57
USP48-208ENST00000479177 OR4C12Q96R67 309 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 CLCC1Q96S66 551 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 COMMD5Q9GZQ3 224 aa5.26□□□□□ -1.57
USP48-208ENST00000479177 PLEKHA3Q9HB20 300 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms