RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TMEM187Q14656 261 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 TATDN3Q17R31 274 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 ZNF57Q68EA5 555 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-217ENST00000479161 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 SELENOHQ8IZQ5 122 aaKnown RBP11.89□□□□□ -0.51
C9orf3-217ENST00000479161 OR10W1Q8NGF6 305 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 OR1P1Q8NH06 330 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 S100ZQ8WXG8 99 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-217ENST00000479161 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
C9orf3-217ENST00000479161 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 SEC14L6B5MCN3 397 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 PRH1P02810 166 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 IL7P13232 177 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 RAB25P57735 213 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 EXOSC2Q13868 293 aaKnown RBP11.88□□□□□ -0.51
C9orf3-217ENST00000479161 C1QL4Q86Z23 238 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 OR2C3Q8N628 320 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 LRTM2Q8N967 370 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 EEF1AKMT3Q96AZ1 226 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-217ENST00000479161 DMRT1Q9Y5R6 373 aa11.88□□□□□ -0.51
C9orf3-217ENST00000479161 A0A0B4J2A0 478 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 A0A1B0GVG6 124 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 NDUFB8O95169 186 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 SLURP1P55000 103 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 ERHP84090 104 aaKnown RBP11.87□□□□□ -0.51
C9orf3-217ENST00000479161 PVRIGQ6DKI7 326 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 LHFPL5Q8TAF8 219 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 SHPKQ9UHJ6 478 aa11.87□□□□□ -0.51
C9orf3-217ENST00000479161 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
C9orf3-217ENST00000479161 NDUFB6O95139 128 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 AKR1C4P17516 323 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 LGI3Q8N145 548 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 PDCD10Q9BUL8 212 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 ELOVL1Q9BW60 279 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 PLEKHA3Q9HB20 300 aa11.86□□□□□ -0.51
C9orf3-217ENST00000479161 ANKRD34BA5PLL1 514 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 LGALS9O00182 355 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 BMPR1BO00238 502 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 ST8SIA3O43173 380 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
C9orf3-217ENST00000479161 REG1AP05451 166 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 FCGR2BP31994 310 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-217ENST00000479161 SPCS3P61009 180 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 ZNF846Q147U1 533 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 RPEL1Q2QD12 228 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 Q6ZNX1 250 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 Q6ZRM9 215 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 CENPSQ8N2Z9 138 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 OR9G4Q8NGQ1 327 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 ZNF502Q8TBZ5 544 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 CCDC140Q96MF4 163 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
C9orf3-217ENST00000479161 WDR12Q9GZL7 423 aaKnown RBP11.85□□□□□ -0.51
C9orf3-217ENST00000479161 GAR1Q9NY12 217 aaKnown RBP11.85□□□□□ -0.51
C9orf3-217ENST00000479161 A0A0G2JRQ6 117 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 IFNA17P01571 189 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 TRBV12-3P01733 135 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 SLC25A6P12236 298 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 MECP2P51608 486 aaKnown RBP11.84□□□□□ -0.51
C9orf3-217ENST00000479161 CCR6P51684 374 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 SLC35G3Q8N808 338 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 RNASE11Q8TAA1 199 aaKnown RBP11.84□□□□□ -0.51
C9orf3-217ENST00000479161 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 TXN2Q99757 166 aa11.84□□□□□ -0.51
C9orf3-217ENST00000479161 A0A1B0GU03 582 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 CORTO00230 105 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 PLA2G10O15496 165 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 SFT2D2O95562 160 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 HLA-AP01891 365 aaKnown RBP11.83□□□□□ -0.52
C9orf3-217ENST00000479161 SULT1A3P0DMM9 295 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 SULT1A4P0DMN0 295 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 BTCP35070 178 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
C9orf3-217ENST00000479161 MFAP2P55001 183 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 IZUMO4Q1ZYL8 232 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 BSXQ3C1V8 233 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 SPSB3Q6PJ21 355 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 TMED4Q7Z7H5 227 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 AURKAIP1Q9NWT8 199 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-217ENST00000479161 PEMTQ9UBM1 199 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
C9orf3-217ENST00000479161 MFSD2BA6NFX1 497 aa11.82□□□□□ -0.52
C9orf3-217ENST00000479161 K7EIM0 57 aa11.82□□□□□ -0.52
C9orf3-217ENST00000479161 CLEC3BP05452 202 aa11.82□□□□□ -0.52
C9orf3-217ENST00000479161 SNCAP37840 140 aa11.82□□□□□ -0.52
C9orf3-217ENST00000479161 ATP5IP56385 69 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-217ENST00000479161 DEFA5Q01523 94 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms