RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FLVCR2Q9UPI3 526 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 S4R3C0 116 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 A0A0B4J293 547 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 FAM223BA6NKX1 122 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 ST8SIA3O43173 380 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 LYRM1O43325 122 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 NDUFB6O95139 128 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 NXPH3O95157 252 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 IFNA17P01571 189 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 TRBV12-3P01733 135 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 P0C879 139 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 RUNX1Q01196 453 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 ATP5G2Q06055 141 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 PPP1R1AQ13522 171 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 FHL3Q13643 280 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 TMEM128Q5BJH2 165 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 FAM223AQ8IWN6 122 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 SLC35G3Q8N808 338 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 NECAP1Q8NC96 275 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 GALNT14Q96FL9 552 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 RCC1LQ96I51 464 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 USMG5Q96IX5 58 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 TMEM56Q96MV1 263 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 C7orf50Q9BRJ6 194 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 CCDC32Q9BV29 185 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 WDR12Q9GZL7 423 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 PLEKHA3Q9HB20 300 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 FBXL7Q9UJT9 491 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 TRBV9A0A0B4J1U6 114 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 HSPB1P04792 205 aaKnown RBP5.32□□□□□ -1.56
BRCA1-215ENST00000478531 CRYGCP07315 174 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 HOXD3P31249 432 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-215ENST00000478531 HOXA1P49639 335 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-215ENST00000478531 PRCDQ00LT1 54 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 ZNF846Q147U1 533 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 THOC7Q6I9Y2 204 aaKnown RBP5.32□□□□□ -1.56
BRCA1-215ENST00000478531 LINC00299Q6ZSB3 139 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 CADM3Q8N126 398 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 FANCD2OSQ96PS1 177 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 SRSF8Q9BRL6 282 aaKnown RBP5.32□□□□□ -1.56
BRCA1-215ENST00000478531 CACNG5Q9UF02 275 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 TMEM56-RWDD3S4R434 201 aa5.32□□□□□ -1.56
BRCA1-215ENST00000478531 IGLV11-55A0A075B6I3 123 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 IGHV3-21A0A0B4J1V1 117 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 MFSD2BA6NFX1 497 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 PPP5D1E7EU14 171 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 PLA2G10O15496 165 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 CYB5BO43169 146 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 NDUFB8O95169 186 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 BRI3O95415 125 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 HLA-AP01891 365 aaKnown RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 PRB2P02812 416 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 HIST1H1BP16401 226 aaKnown RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 ANXA7P20073 488 aaKnown RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 HSPE1P61604 102 aaKnown RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SRPXP78539 464 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 ANKRD55Q3KP44 614 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SAMD5Q5TGI4 173 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SLC25A24Q6NUK1 477 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 Q6ZRM9 215 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 LYZL2Q7Z4W2 148 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 HSD17B13Q7Z5P4 300 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 ZNF429Q86V71 674 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 FAM219AQ8IW50 185 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 LGI3Q8N145 548 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 DCUN1D4Q92564 292 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 GPR146Q96CH1 333 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 C20orf85Q9H1P6 137 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 RANGRFQ9HD47 186 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 ENY2Q9NPA8 101 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 PEF1Q9UBV8 284 aaKnown RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 DMRT1Q9Y5R6 373 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 F11RQ9Y624 299 aaKnown RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SORL1Q92673 2214 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 TRAV6A0A075B6T7 132 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 A0A0B4J2A0 478 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SEC14L6B5MCN3 397 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 OVOL1O14753 267 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SFT2D2O95562 160 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SULT1A3P0DMM9 295 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SULT1A4P0DMN0 295 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 DEFA6Q01524 100 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 RPEL1Q2QD12 228 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 ZNF343Q6P1L6 599 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 CLEC19AQ6UXS0 136 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 IL22RA2Q969J5 263 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 EEF1AKMT3Q96AZ1 226 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 MISP3Q96FF7 219 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 ZC4H2Q9NQZ6 224 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-215ENST00000478531 NUDT15Q9NV35 164 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 THYN1Q9P016 225 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 SHPKQ9UHJ6 478 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 TBC1D24Q9ULP9 559 aa5.31□□□□□ -1.56
BRCA1-215ENST00000478531 CEBPZOSA8MTT3 80 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 BMPR1BO00238 502 aa5.3□□□□□ -1.56
BRCA1-215ENST00000478531 SAP30O75446 220 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms