RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ZFAND1Q8TCF1 268 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 DYNLRB2Q8TF09 96 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 MRGPRFQ96AM1 343 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 B3GALNT1O75752 331 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 PGAM2P15259 253 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 PRCDQ00LT1 54 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 SPSB3Q6PJ21 355 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 PLET1Q6UQ28 207 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 UNQ9165/PRO28630Q6UXU0 137 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 SCARB1Q8WTV0 552 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 BSCL2Q96G97 398 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-215ENST00000478473 TP53RKQ96S44 253 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 HINT2Q9BX68 163 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 SLIRPQ9GZT3 109 aaKnown RBP17.65■□□□□ 0.42
C9orf3-215ENST00000478473 ZMAT4Q9H898 229 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 PALMDQ9NP74 551 aa17.65■□□□□ 0.42
C9orf3-215ENST00000478473 INS-IGF2F8WCM5 200 aa17.64■□□□□ 0.41
C9orf3-215ENST00000478473 CTSDP07339 412 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-215ENST00000478473 PI3P19957 117 aa17.64■□□□□ 0.41
C9orf3-215ENST00000478473 FCGR2BP31994 310 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-215ENST00000478473 MEF2DQ14814 521 aa17.64■□□□□ 0.41
C9orf3-215ENST00000478473 OR4A16Q8NH70 328 aa17.64■□□□□ 0.41
C9orf3-215ENST00000478473 SOSTQ9BQB4 213 aa17.64■□□□□ 0.41
C9orf3-215ENST00000478473 NXF2Q9GZY0 626 aaKnown RBP17.64■□□□□ 0.41
C9orf3-215ENST00000478473 C21orf62Q9NYP8 219 aa17.64■□□□□ 0.41
C9orf3-215ENST00000478473 C3orf85A0A1B0GTC6 90 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 ZNF320A2RRD8 509 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 IGKV1-5P01602 117 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 UCP1P25874 307 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 SURF2Q15527 256 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-215ENST00000478473 UXS1Q8NBZ7 420 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 OR13C8Q8NGS7 320 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 CACNG8Q8WXS5 425 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 TMEM190Q8WZ59 177 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 DIRAS2Q96HU8 199 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 SLC2A8Q9NY64 477 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 MRPL27Q9P0M9 148 aaKnown RBP17.63■□□□□ 0.41
C9orf3-215ENST00000478473 MLXQ9UH92 298 aa17.63■□□□□ 0.41
C9orf3-215ENST00000478473 TRAV25A0A0B4J276 109 aa17.62■□□□□ 0.41
C9orf3-215ENST00000478473 H3BMQ9 156 aa17.62■□□□□ 0.41
C9orf3-215ENST00000478473 GSTZ1O43708 216 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-215ENST00000478473 CCDC71LQ8N9Z2 235 aa17.62■□□□□ 0.41
C9orf3-215ENST00000478473 NEURL2Q9BR09 285 aa17.62■□□□□ 0.41
C9orf3-215ENST00000478473 UFC1Q9Y3C8 167 aa17.62■□□□□ 0.41
C9orf3-215ENST00000478473 C3orf84H3BNL1 204 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 I3L2K1 104 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 ATG12O94817 140 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 ADMP35318 185 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 PPP5CP53041 499 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 CD81P60033 236 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 HAGHQ16775 308 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 TM4SF20Q53R12 229 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 ZNF57Q68EA5 555 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-215ENST00000478473 PVRIGQ6DKI7 326 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 TMEM61Q8N0U2 210 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 ISOC1Q96CN7 298 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 GAR1Q9NY12 217 aaKnown RBP17.61■□□□□ 0.41
C9orf3-215ENST00000478473 COPZ2Q9P299 210 aa17.61■□□□□ 0.41
C9orf3-215ENST00000478473 NBEAL2Q6ZNJ1 2754 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 A0A0B4J293 547 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 NDUFA4O00483 81 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 CD7P09564 240 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 AARDQ4LEZ3 155 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 MARCH1Q8TCQ1 289 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 WDR89Q96FK6 387 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-215ENST00000478473 ZNF414Q96IQ9 312 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 TXN2Q99757 166 aa17.6■□□□□ 0.41
C9orf3-215ENST00000478473 RTBDNQ9BSG5 229 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-215ENST00000478473 OR2T8A6NH00 312 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 K7EMT4 169 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 CDS2O95674 445 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 CTSGP08311 255 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 AKAIN1P0CW23 69 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 IL18Q14116 193 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 SCGB2B2Q4G0G5 96 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 CITED4Q96RK1 184 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 CHRDL1Q9BU40 450 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 TUBA4BQ9H853 241 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 RSL24D1Q9UHA3 163 aaKnown RBP17.59■□□□□ 0.41
C9orf3-215ENST00000478473 GPR132Q9UNW8 380 aa17.59■□□□□ 0.41
C9orf3-215ENST00000478473 ANKRD20A5PA0PJZ0 165 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 DISC1C4P0D8 188 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 ERHP84090 104 aaKnown RBP17.58■□□□□ 0.4
C9orf3-215ENST00000478473 IZUMO4Q1ZYL8 232 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 OR4C16Q8NGL9 310 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 SPATA25Q9BR10 227 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 TMEM222Q9H0R3 208 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 C5orf66Q9H5L9 145 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 DAZ1Q9NQZ3 744 aaKnown RBP17.58■□□□□ 0.4
C9orf3-215ENST00000478473 CEPT1Q9Y6K0 416 aa17.58■□□□□ 0.4
C9orf3-215ENST00000478473 TNFSF8P32971 234 aa17.57■□□□□ 0.4
C9orf3-215ENST00000478473 SP6Q3SY56 376 aa17.57■□□□□ 0.4
C9orf3-215ENST00000478473 FAAP20Q6NZ36 180 aa17.57■□□□□ 0.4
C9orf3-215ENST00000478473 GLYATL2Q8WU03 294 aa17.57■□□□□ 0.4
C9orf3-215ENST00000478473 PRRT1Q99946 306 aa17.57■□□□□ 0.4
C9orf3-215ENST00000478473 PLEKHA3Q9HB20 300 aa17.57■□□□□ 0.4
C9orf3-215ENST00000478473 IGHV3-35A0A0C4DH35 117 aa17.56■□□□□ 0.4
C9orf3-215ENST00000478473 NOL3O60936 208 aaKnown RBP17.56■□□□□ 0.4
C9orf3-215ENST00000478473 AKR1C2P52895 323 aa17.56■□□□□ 0.4
C9orf3-215ENST00000478473 GUCA2BQ16661 112 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms