RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 DOCK1Q14185 1865 aa2.75□□□□□ -1.97
FNDC3B-209ENST00000478016 PLIN4Q96Q06 1357 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 NUP210LQ5VU65 1888 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 A0A087WZ39 114 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 LOC102724200A0A096LPH7 203 aaPredicted RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 IGLV5-52A0A0A0MRZ9 124 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 IGHV2-26A0A0B4J1V2 119 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TRAV8-2A0A0B4J237 113 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 CCL15-CCL14A0A0B4J2E2 113 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 A0A0D9SG52 128 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TRBV7-6A0A0J9YX20 115 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 PLAC8L1A1L4L8 177 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 ARRDC5A6NEK1 342 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 FAM183AA6NL82 134 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 SLC17A2O00624 439 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 ISLRO14498 428 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 YPEL1O60688 119 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BKO60814 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HLA-DRB1P01911 266 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HLA-DQB1P01920 261 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BJP06899 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 MMP7P09237 267 aaPredicted RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 LAMP1P11279 417 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 CTSEP14091 401 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 FABP4P15090 132 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HOXB6P17509 224 aaKnown RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BOP23527 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 FKBP2P26885 142 aaKnown RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BBP33778 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 PRSS3P35030 304 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OPRM1P35372 400 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 NMUP48645 174 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BDP58876 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BCP62807 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HLA-DRB3P79483 266 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 EIF3IQ13347 325 aaKnown RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 C1DQ13901 141 aaKnown RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 DUSP5Q16690 384 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST2H2BEQ16778 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 GSG1Q2KHT4 349 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF718Q3SXZ3 478 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TTC32Q5I0X7 151 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 RUSC1-AS1Q66K80 236 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF880Q6PDB4 577 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 Q6ZUT4 128 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 MSRB3Q8IXL7 192 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 NPWQ8N729 165 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 DCAF4L2Q8NA75 395 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OR4B1Q8NGF8 309 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OR5D14Q8NGL3 314 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OR10AC1Q8NH08 325 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OR52P1PQ8NH57 321 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OR4A5Q8NH83 315 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 ATP6V0E2Q8NHE4 81 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 SLC25A40Q8TBP6 338 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 OR51E1Q8TCB6 317 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 RPS4Y2Q8TD47 263 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 LMX1AQ8TE12 382 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BHQ93079 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TMEM230Q96A57 120 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 NEURL3Q96EH8 262 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 IGF2BP2-AS1Q96M15 143 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 YPEL2Q96QA6 119 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 PKMYT1Q99640 499 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BNQ99877 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 HIST1H2BMQ99879 126 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 PRSS27Q9BQR3 290 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 DUSP21Q9H596 190 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 C6orf106Q9H6K1 298 aaPredicted RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 EDA2RQ9HAV5 297 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TMEM9BQ9NQ34 198 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 EXOSC3Q9NQT5 275 aaKnown RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 KCNIP2Q9NS61 270 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 RBM12B-AS1Q9P1G2 102 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 FUT9Q9Y231 359 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 PYGO1Q9Y3Y4 419 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 LOC285556D6RIA3 1793 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TDRD15B5MCY1 1934 aaKnown RBP2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 MYH1P12882 1939 aa2.74□□□□□ -1.97
FNDC3B-209ENST00000478016 TTC3P53804 2025 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 ARID2Q68CP9 1835 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 ATAD5Q96QE3 1844 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 hCG_1818297A0A087WSY0 165 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 IGHV3OR16-9A0A0B4J2B5 98 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 LOC100131303A0A0U1RQF7 123 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 WI2-2373I1.2A0A1W2PRP0 233 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 KNCNA6PVL3 124 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 A8MT66 165 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 HMSDA8MTL9 139 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 BBIP1A8MTZ0 92 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 K7EP34 96 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 SOCS1O15524 211 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 NDUFS7O75251 213 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 NUDT14O95848 222 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 NAPSAO96009 420 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 CA2P00918 260 aa2.73□□□□□ -1.97
FNDC3B-209ENST00000478016 PTHP01270 115 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms