RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SLC25A15Q9Y619 301 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 VPS13AQ96RL7 3174 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 TMEM131Q92545 1883 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 ACAA1P09110 424 aaPredicted RBP9.15□□□□□ -0.94
COL27A1-204ENST00000477421 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 ARL3P36405 182 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 DUX4L9Q6RFH8 374 aaPredicted RBP9.15□□□□□ -0.94
COL27A1-204ENST00000477421 OR4C13Q8NGP0 309 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 IMMP2LQ96T52 175 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 TMEM250H0YL14 139 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.95
COL27A1-204ENST00000477421 IQCJQ1A5X6 159 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 ETFRF1Q6IPR1 90 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 CYP2G1PQ6ZSU1 146 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 RASL11BQ9BPW5 248 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 TNFRSF19Q9NS68 423 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 WASHC3Q9Y3C0 194 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 PAM16Q9Y3D7 125 aa9.15□□□□□ -0.95
COL27A1-204ENST00000477421 IGHV3OR16-8A0A075B7F1 116 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 PAX9P55771 341 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 RPL23P62829 140 aaKnown RBP9.14□□□□□ -0.95
COL27A1-204ENST00000477421 MIR17HGQ75NE6 70 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 GGACTQ9BVM4 153 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
COL27A1-204ENST00000477421 PGPA6NDG6 321 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 IGKV3-15P01624 115 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 ELOBQ15370 118 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 PPIAL4CA0A0B4J2A2 164 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 SAA1P0DJI8 122 aaPredicted RBP9.14□□□□□ -0.95
COL27A1-204ENST00000477421 PPIAL4GP0DN37 164 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 USF1P22415 310 aaPredicted RBP9.14□□□□□ -0.95
COL27A1-204ENST00000477421 COL8A1P27658 744 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 SPSB3Q6PJ21 355 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 PNKDQ8N490 385 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 OR4F17Q8NGA8 305 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 OR9G1Q8NH87 305 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 VN1R17PQ8TDU5 208 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 ZNF785A8K8V0 405 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 YPEL1O60688 119 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 G0S2P27469 103 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 DLX1P56177 255 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 MLANAQ16655 118 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 YPEL2Q96QA6 119 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 FBXL15Q9H469 300 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 DNAJC4Q9NNZ3 241 aa9.14□□□□□ -0.95
COL27A1-204ENST00000477421 SETD2Q9BYW2 2564 aaPredicted RBP9.13□□□□□ -0.95
COL27A1-204ENST00000477421 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 LY6HO94772 140 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 PLA2G2CQ5R387 149 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 SSX7Q7RTT5 188 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 VAMP8Q9BV40 100 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 COA4Q9NYJ1 87 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 ARL2-SNX15V9GYD0 113 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 KIR3DL3Q8N743 410 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 RNF115Q9Y4L5 304 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 IGHG3P01860 377 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H1BP16401 226 aaKnown RBP9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 CEACAM3P40198 252 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 ECSCRQ19T08 205 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HLA-DRB5Q30154 266 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
COL27A1-204ENST00000477421 PRR31Q5SQ13 230 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 IBA57Q5T440 356 aaKnown RBP9.13□□□□□ -0.95
COL27A1-204ENST00000477421 TCF23Q7RTU1 214 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 ASCL5Q7RTU5 278 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 NCOR1P1Q9H4R4 102 aa9.13□□□□□ -0.95
COL27A1-204ENST00000477421 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.12□□□□□ -0.95
COL27A1-204ENST00000477421 LINC00587B1AMM8 73 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 HYPMO75409 117 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 TDGF1P13385 188 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 CENPWQ5EE01 88 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 SFRP2Q96HF1 295 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 NOL4LQ96MY1 436 aaPredicted RBP9.12□□□□□ -0.95
COL27A1-204ENST00000477421 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 MBNL3Q9NUK0 354 aaKnown RBP9.12□□□□□ -0.95
COL27A1-204ENST00000477421 PPP1R14DQ9NXH3 145 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 SPATA31B1PQ5VZV4 182 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 NEUROG1Q92886 237 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 AMMECR1Q9Y4X0 333 aaPredicted RBP9.12□□□□□ -0.95
COL27A1-204ENST00000477421 IGHV3OR16-13A0A075B7E8 117 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 IGHV3-74A0A0B4J1X5 117 aa9.12□□□□□ -0.95
COL27A1-204ENST00000477421 DLL1O00548 723 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms