RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF436Q9C0F3 470 aaPredicted RBP8.67□□□□□ -1.02
VARS2-208ENST00000477052 MRPL27Q9P0M9 148 aaKnown RBP8.67□□□□□ -1.02
VARS2-208ENST00000477052 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 hCG_2014768A0A024R1R8 64 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 IGHV3-49A0A0A0MS15 119 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 MARCH11A6NNE9 402 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 FAM25AB3EWG3 89 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 FAM25CB3EWG5 89 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 FAM25GB3EWG6 89 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
VARS2-208ENST00000477052 IGHV3-48P01763 117 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 RPL35AP18077 110 aaKnown RBP8.66□□□□□ -1.02
VARS2-208ENST00000477052 ADMP35318 185 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 CBX5P45973 191 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 ZNF124Q15973 351 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 PHLDA2Q53GA4 152 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 OR2C3Q8N628 320 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 AIFM2Q9BRQ8 373 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 SLIRPQ9GZT3 109 aaKnown RBP8.66□□□□□ -1.02
VARS2-208ENST00000477052 FXYD6Q9H0Q3 95 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 MIXL1Q9H2W2 232 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 PLEKHA2Q9HB19 425 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 OR51B2Q9Y5P1 312 aa8.66□□□□□ -1.02
VARS2-208ENST00000477052 IGKV3-7A0A075B6H7 116 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 LY6G6CO95867 125 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 TFPI2P48307 235 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 ERVK-16P61578 105 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 ANKRD55Q3KP44 614 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 ODF3L2Q3SX64 289 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 LYG2Q86SG7 212 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 APRG1Q8IVJ8 170 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 OR1L8Q8NGR8 309 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 OR5B3Q8NH48 314 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 VN1R17PQ8TDU5 208 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 SCARB1Q8WTV0 552 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 MARC2Q969Z3 335 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 MOB3AQ96BX8 217 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 ZNF414Q96IQ9 312 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 NXF2Q9GZY0 626 aaKnown RBP8.65□□□□□ -1.02
VARS2-208ENST00000477052 C5orf66Q9H5L9 145 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 NDUFA4L2Q9NRX3 87 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 COMMD9Q9P000 198 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 ANAPC10Q9UM13 185 aa8.65□□□□□ -1.02
VARS2-208ENST00000477052 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 K7EIM0 57 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 CTDSP2O14595 271 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 RGS5O15539 181 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 SPRY2O43597 315 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
VARS2-208ENST00000477052 F2RP25116 425 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 HLA-DMAP28067 261 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
VARS2-208ENST00000477052 PRSS3P35030 304 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 NDUFA5Q16718 116 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 Q56UQ5 140 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 DHRS11Q6UWP2 260 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 LINC00299Q6ZSB3 139 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 LYSMD2Q8IV50 215 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 SLC38A6Q8IZM9 456 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 OR5H2Q8NGV7 314 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 SRSF8Q9BRL6 282 aaKnown RBP8.64□□□□□ -1.03
VARS2-208ENST00000477052 SCPEP1Q9HB40 452 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
VARS2-208ENST00000477052 C21orf62Q9NYP8 219 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 THYN1Q9P016 225 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
VARS2-208ENST00000477052 F11RQ9Y624 299 aaKnown RBP8.64□□□□□ -1.03
VARS2-208ENST00000477052 TSPAN4O14817 238 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 SNAPC5O75971 98 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 HRH1P35367 487 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 ELLP55199 621 aaPredicted RBP8.63□□□□□ -1.03
VARS2-208ENST00000477052 IZUMO4Q1ZYL8 232 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 RGS21Q2M5E4 152 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 SPINK9Q5DT21 86 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 MCFD2Q8NI22 146 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 GPX8Q8TED1 209 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 C15orf40Q8WUR7 153 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 LSM10Q969L4 123 aaKnown RBP8.63□□□□□ -1.03
VARS2-208ENST00000477052 MISP3Q96FF7 219 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
VARS2-208ENST00000477052 RNF2Q99496 336 aa8.63□□□□□ -1.03
VARS2-208ENST00000477052 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
VARS2-208ENST00000477052 GPR31O00270 319 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 NDUFA4O00483 81 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 YIF1AO95070 293 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 IGKV1-39P01597 117 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 IGKV1D-39P04432 117 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 CTSGP08311 255 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 NAT1P18440 290 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 S100A1P23297 94 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 APOC4P55056 127 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 TNFRSF9Q07011 255 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 RNASE12Q5GAN4 147 aaKnown RBP8.62□□□□□ -1.03
VARS2-208ENST00000477052 SNX29P2Q8IUI4 249 aa8.62□□□□□ -1.03
VARS2-208ENST00000477052 GBGT1Q8N5D6 347 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms