RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 WDR89Q96FK6 387 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-205ENST00000476494 CIB3Q96Q77 187 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-205ENST00000476494 RAB40CQ96S21 281 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 CLCC1Q96S66 551 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 PRSS22Q9GZN4 317 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 CACNG5Q9UF02 275 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 PRNDQ9UKY0 176 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 ZNF257Q9Y2Q1 563 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 NSG2Q9Y328 171 aa5.03□□□□□ -1.6
CLDN4-205ENST00000476494 A0A1W2PPI3 338 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 A6NDX4 124 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 MPTX1A8MV57 137 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 K7EPK0 472 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 L7N2F9 121 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 UPK2O00526 184 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 SYNGR2O43760 224 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 RBMXL2O75526 392 aaKnown RBP5.02□□□□□ -1.61
CLDN4-205ENST00000476494 KBTBD11O94819 623 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 OR2F2O95006 317 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 MOSP00540 346 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
CLDN4-205ENST00000476494 IGKV1-16P04430 117 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 MAS1LP35410 378 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 MYCNOSP40205 109 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 P2RY1P47900 373 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 LINC00205P59089 165 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 S100A10P60903 97 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 SPCS3P61009 180 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 RPL23AP62750 156 aaKnown RBP5.02□□□□□ -1.61
CLDN4-205ENST00000476494 VAMP2P63027 116 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 RPP30P78346 268 aaKnown RBP5.02□□□□□ -1.61
CLDN4-205ENST00000476494 TNFRSF9Q07011 255 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 CD300CQ08708 224 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 OR2F1Q13607 317 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 RAB32Q13637 225 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 EBI3Q14213 229 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 DIAPH2-AS1Q14236 149 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 ZNF345Q14585 488 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 SSX2Q16385 188 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 OR4A47Q6IF82 309 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 Q6ZRM9 215 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 ACOT7LQ6ZUV0 252 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 PUSL1Q8N0Z8 303 aaKnown RBP5.02□□□□□ -1.61
CLDN4-205ENST00000476494 OR5B3Q8NH48 314 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 TMEM167AQ8TBQ9 72 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 SMIM8Q96KF7 97 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 HARBI1Q96MB7 349 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 RNF126Q9BV68 326 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 SLC25A31Q9H0C2 315 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 TMEM140Q9NV12 185 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 HSPB7Q9UBY9 170 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 TNFSF18Q9UNG2 199 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 FOXA2Q9Y261 457 aaPredicted RBP5.02□□□□□ -1.61
CLDN4-205ENST00000476494 WSB1Q9Y6I7 421 aa5.02□□□□□ -1.61
CLDN4-205ENST00000476494 FXYD6-FXYD2A0A087WZ82 144 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 TRAV14DV4A0A0A6YYC5 116 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 A0A0G2JRQ6 117 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 C15orf61A6NNL5 157 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 G3V3Q6 166 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 SMLR1H3BR10 107 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 BOLA2-SMG1P6H3BVE0 249 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 TAAR5O14804 337 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 TSC22D2O75157 780 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 IFNA17P01571 189 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 SNRNP70P08621 437 aaKnown RBP5.01□□□□□ -1.61
CLDN4-205ENST00000476494 VDAC2P45880 294 aaPredicted RBP5.01□□□□□ -1.61
CLDN4-205ENST00000476494 HSPE1P61604 102 aaKnown RBP5.01□□□□□ -1.61
CLDN4-205ENST00000476494 LRRC37A5PQ49AS3 106 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 Q5BKY6 102 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 CXorf66Q5JRM2 361 aaPredicted RBP5.01□□□□□ -1.61
CLDN4-205ENST00000476494 C9orf66Q5T8R8 295 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 HSD17B13Q7Z5P4 300 aaPredicted RBP5.01□□□□□ -1.61
CLDN4-205ENST00000476494 LHFPL4Q7Z7J7 247 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 MMD2Q8IY49 270 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 NPBQ8NG41 125 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 OR11H4Q8NGC9 324 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 DCUN1D4Q92564 292 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 AQP10Q96PS8 301 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 COMMD5Q9GZQ3 224 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 MFFQ9GZY8 342 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 HIPK2Q9H2X6 1198 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 TMEM14BQ9NUH8 114 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 C19orf73Q9NVV2 129 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 KIAA1456Q9P272 454 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 MBD2Q9UBB5 411 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 TCF19Q9Y242 345 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 LSM5Q9Y4Y9 91 aaKnown RBP5.01□□□□□ -1.61
CLDN4-205ENST00000476494 HILPDAQ9Y5L2 63 aa5.01□□□□□ -1.61
CLDN4-205ENST00000476494 SRRM4A7MD48 611 aaKnown RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 CEBPZOSA8MTT3 80 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 A8MZ25 164 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 INS-IGF2F8WCM5 200 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 H0YIZ8 118 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 RRHO14718 337 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 NBR2O15453 112 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 ARPC5O15511 151 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 ACTL6BO94805 426 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 IGKV1D-33P01593 117 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms