RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 GLYATL2Q8WU03 294 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 ASB13Q8WXK3 278 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 TNFRSF14Q92956 283 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 RBPMSQ93062 196 aaKnown RBP4.11□□□□□ -1.75
SSR3-206ENST00000476217 IL22RA2Q969J5 263 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 C5orf30Q96GV9 206 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 SEC22AQ96IW7 307 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 ADTRPQ96IZ2 230 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 C18orf12Q96KH6 178 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 SPIN2AQ99865 258 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 SPIN2BQ9BPZ2 258 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 MRPL20Q9BYC9 149 aaKnown RBP4.11□□□□□ -1.75
SSR3-206ENST00000476217 HEXA-AS1Q9H8Q6 139 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 GSKIPQ9P0R6 139 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 KPTNQ9Y664 436 aa4.11□□□□□ -1.75
SSR3-206ENST00000476217 YLPM1P49750 1951 aaKnown RBP4.11□□□□□ -1.75
SSR3-206ENST00000476217 FXYD6-FXYD2A0A087WZ82 144 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 DUXBA0A1W2PPF3 345 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 A0A1W2PRD5 423 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 A0A1W2PRF3 423 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 A0A1W2PRM7 423 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 MPTX1A8MV57 137 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 B4DSR2 109 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 BUB1B-PAK6H3BSN5 160 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 H7C2Y5 167 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 TXNL1O43396 289 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 RAMP3O60896 148 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 FCGR3BO75015 233 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 S1PR2O95136 353 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 CDS2O95674 445 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 C1QBP02746 253 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 MSMBP08118 114 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 PET100P0DJ07 73 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 RPA2P15927 270 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 HLA-GP17693 338 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 VDAC1P21796 283 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 PRTN3P24158 256 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 HTR1DP28221 377 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 DUTP33316 252 aaKnown RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 CEACAM3P40198 252 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 NKX2-5P52952 324 aaPredicted RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 ERVK-16P61578 105 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 RPL30P62888 115 aaKnown RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 FGL1Q08830 312 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 EIF4EBP1Q13541 118 aaPredicted RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 SMCO1Q147U7 214 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 VWC2Q2TAL6 325 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 HLA-DRB5Q30154 266 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 FAM71F2Q6NXP2 309 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 CENPVQ7Z7K6 275 aaPredicted RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 TGIF2LXQ8IUE1 241 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 PDZD9Q8IXQ8 264 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 SELENOHQ8IZQ5 122 aaKnown RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 C11orf42Q8N5U0 333 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 LINC00311Q8N616 119 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 Q8N7P7 452 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 MAPK1IP1LQ8NDC0 245 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 OR4S2Q8NH73 311 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 LHX4Q969G2 390 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 RPEQ96AT9 228 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 TMEM186Q96B77 213 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 C2orf50Q96LR7 162 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 TMEM56Q96MV1 263 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 RANBP3Q9H6Z4 567 aaPredicted RBP4.1□□□□□ -1.75
SSR3-206ENST00000476217 MMP26Q9NRE1 261 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 SLC35D1Q9NTN3 355 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 TMED3Q9Y3Q3 217 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 MMP24Q9Y5R2 645 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 INSIG2Q9Y5U4 225 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 TMEM56-RWDD3S4R434 201 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 LRRK2Q5S007 2527 aa4.1□□□□□ -1.75
SSR3-206ENST00000476217 USF3Q68DE3 2245 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 LEUTXA8MZ59 168 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 RNASEK-C17orf49H0YIS7 233 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 RBFOX2O43251 390 aaKnown RBP eCLIP4.09□□□□□ -1.75
SSR3-206ENST00000476217 ATP6V1G1O75348 118 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 OR2A4O95047 310 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 CRYZL1O95825 349 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 HPRT1P00492 218 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 KRASP01116 189 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 IGLV1-47P01700 117 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 GAPDHP04406 335 aaKnown RBP4.09□□□□□ -1.75
SSR3-206ENST00000476217 CT45A6P0DMU7 189 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 CT45A5P0DMU8 189 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 CT45A7P0DMV0 189 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 RRASP10301 218 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 S100A1P23297 94 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 G6PCP35575 357 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 RAB13P51153 203 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 ZNF137PP52743 207 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 PAX9P55771 341 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 PAX2Q02962 417 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 NMSQ5H8A3 153 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 TPTE2P1Q5T6R2 138 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 RBPMS2Q6ZRY4 209 aaKnown RBP4.09□□□□□ -1.75
SSR3-206ENST00000476217 SSX9Q7RTT3 188 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 H2BFWTQ7Z2G1 175 aa4.09□□□□□ -1.75
SSR3-206ENST00000476217 MOB3BQ86TA1 216 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms