RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 A8MWP4 228 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 CSTAP01040 98 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 HMGN2P05204 90 aaKnown RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 SOD3P08294 240 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 ALDH3A1P30838 453 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 CTBP2P56545 445 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 EMX2Q04743 252 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 TMEM176BQ3YBM2 270 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 HBMQ6B0K9 141 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF550Q7Z398 422 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 MTERF4Q7Z6M4 381 aaKnown RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 C4orf33Q8N1A6 199 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 C3orf22Q8N5N4 141 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 KRTCAP2Q8N6L1 136 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 NATD1Q8N6N6 113 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 CDRT4Q8N9R6 151 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 BPIFB6Q8NFQ5 453 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 OR10D3Q8NH80 312 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 OR2V1Q8NHB1 315 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 GPR119Q8TDV5 335 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 TWIST2Q8WVJ9 160 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 OR5P2Q8WZ92 322 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 PPCDCQ96CD2 204 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 PPP3R2Q96LZ3 170 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 STACQ99469 402 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 COPS4Q9BT78 406 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 MED18Q9BUE0 208 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF436Q9C0F3 470 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 NXF2Q9GZY0 626 aaKnown RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 PAQR5Q9NXK6 330 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 C14orf166Q9Y224 244 aaKnown RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF443Q9Y2A4 671 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-211ENST00000476215 DNAJC15Q9Y5T4 150 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 ANK2Q01484 3957 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 RTTNQ86VV8 2226 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 SMIM23A6NLE4 172 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 TMEM114B3SHH9 223 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 FFAR1O14842 300 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 PSCAO43653 123 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 SCN2BO60939 215 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 SC5DO75845 299 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 CD8AP01732 235 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 BPGMP07738 259 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 GUSBP08236 651 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 CECR9P0C854 216 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 NEFHP12036 1026 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 GTF2F2P13984 249 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 M6PRP20645 277 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 PRTN3P24158 256 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 RPL38P63173 70 aaKnown RBP2.12□□□□□ -2.07
PTCD3-211ENST00000476215 HBA1P69905 142 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF117Q03924 483 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 PLPPR5Q32ZL2 321 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 NCMAPQ5T1S8 102 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 ERICH5Q6P6B1 374 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 TMPPEQ6ZT21 453 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 SYS1Q8N2H4 156 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 DRAXINQ8NBI3 349 aaPredicted RBP2.12□□□□□ -2.07
PTCD3-211ENST00000476215 ATP6V1C2Q8NEY4 427 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 OR5P3Q8WZ94 311 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 CCL17Q92583 94 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF75CPQ92670 426 aaPredicted RBP2.12□□□□□ -2.07
PTCD3-211ENST00000476215 CHMP6Q96FZ7 201 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 OR7D2Q96RA2 312 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 SDF2Q99470 211 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 CCL19Q99731 98 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 TMEM109Q9BVC6 243 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 PLEKHA1Q9HB21 404 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 ACER3Q9NUN7 267 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 FIS1Q9Y3D6 152 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 TENM1Q9UKZ4 2725 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 ABCA1O95477 2261 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 PLCE1Q9P212 2302 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 PKD1L1Q8TDX9 2849 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 FREM1Q5H8C1 2179 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 DSCAMO60469 2012 aa2.12□□□□□ -2.07
PTCD3-211ENST00000476215 EXPH5Q8NEV8 1989 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 IGHV3-15A0A0B4J1V0 119 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 DPRXA6NFQ7 191 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 H3BMM0 161 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 C3orf84H3BNL1 204 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 BIRC5O15392 142 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 HLA-AP01891 365 aaKnown RBP2.11□□□□□ -2.07
PTCD3-211ENST00000476215 OR12D1P0DN82 309 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 BGNP21810 368 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 FKBP2P26885 142 aaKnown RBP2.11□□□□□ -2.07
PTCD3-211ENST00000476215 ELK4P28324 431 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 AGTR1P30556 359 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 RPL14P50914 215 aaKnown RBP2.11□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF83P51522 516 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 DSTNP60981 165 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 VSNL1P62760 191 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 FOXF1Q12946 379 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 SKP2Q13309 424 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 CASP8Q14790 479 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 MAPK14Q16539 360 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 ARHGAP11BQ3KRB8 267 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 ACTL10Q5JWF8 245 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms