RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PFDN5Q99471 154 aa13.54□□□□□ -0.24
TVP23B-202ENST00000476139 CHD8Q9HCK8 2581 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 A0A0U1RQK1 487 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 PPP5D1E7EU14 171 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 E7EUB6 86 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 PRO1933Q9H354 126 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 C1QTNF9P0C862 333 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 LOXP28300 417 aaPredicted RBP13.53□□□□□ -0.24
TVP23B-202ENST00000476139 APOBEC3AP31941 199 aaPredicted RBP13.53□□□□□ -0.24
TVP23B-202ENST00000476139 GAMTQ14353 236 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 SPATA31B1PQ5VZV4 182 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 HIST1H2BLQ99880 126 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
TVP23B-202ENST00000476139 FUT9Q9Y231 359 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 ANKHD1Q8IWZ3 2542 aaKnown RBP13.53□□□□□ -0.24
TVP23B-202ENST00000476139 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 H0YJW9 148 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 MPDU1O75352 247 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 CHRNB4P30926 498 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 OR10X1Q8NGY0 326 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 PACRGQ96M98 296 aaPredicted RBP13.53□□□□□ -0.24
TVP23B-202ENST00000476139 PRNDQ9UKY0 176 aa13.53□□□□□ -0.24
TVP23B-202ENST00000476139 SIAH2O43255 324 aa13.52□□□□□ -0.24
TVP23B-202ENST00000476139 FAM78BQ5VT40 261 aa13.52□□□□□ -0.24
TVP23B-202ENST00000476139 TEPPQ6URK8 271 aa13.52□□□□□ -0.24
TVP23B-202ENST00000476139 HARBI1Q96MB7 349 aa13.52□□□□□ -0.24
TVP23B-202ENST00000476139 SRD5A3Q9H8P0 318 aa13.52□□□□□ -0.24
TVP23B-202ENST00000476139 PLEKHA3Q9HB20 300 aa13.52□□□□□ -0.24
TVP23B-202ENST00000476139 CD3EP07766 207 aa13.52□□□□□ -0.25
TVP23B-202ENST00000476139 PLXNB1O43157 2135 aa13.52□□□□□ -0.25
TVP23B-202ENST00000476139 IGFBP2P18065 325 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 PRCDQ00LT1 54 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 NHLH1Q02575 133 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 SSX8Q7RTT4 187 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 COL6A6A6NMZ7 2263 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 XKRY2A2RUG3 117 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 CCL21O00585 134 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 FOXH1O75593 365 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 ACTL6BO94805 426 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 TMEM30BQ3MIR4 351 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 STPG3Q8N7X2 389 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 OR5AN1Q8NGI8 311 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 NCOR2Q9Y618 2525 aa13.51□□□□□ -0.25
TVP23B-202ENST00000476139 C11orf42Q8N5U0 333 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 OR2T10Q8NGZ9 312 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 RITA1Q96K30 269 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 MALRD1Q5VYJ5 2156 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 IGKV1OR2-108A0A075B7D4 117 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 ELOA3CA0A087WX78 387 aaPredicted RBP13.5□□□□□ -0.25
TVP23B-202ENST00000476139 LINC01551Q86U37 167 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 FLYWCH2Q96CP2 140 aaKnown RBP13.5□□□□□ -0.25
TVP23B-202ENST00000476139 PRDM13Q9H4Q3 707 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 ABCA1O95477 2261 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 GATA2P23769 480 aaPredicted RBP13.5□□□□□ -0.25
TVP23B-202ENST00000476139 EFNB3Q15768 340 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 RAB1CQ92928 201 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
TVP23B-202ENST00000476139 TRBV20OR9-2A0A075B6H5 130 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 SCO2A0A1W2PP80 73 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 CA7P43166 264 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 DLX6P56179 175 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 HRNRQ86YZ3 2850 aaPredicted RBP13.49□□□□□ -0.25
TVP23B-202ENST00000476139 IGHV3-72A0A0B4J1Y9 119 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 B9A039 149 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 APOA2P02652 100 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 MUC15Q8N387 334 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 OSR1Q8TAX0 266 aaPredicted RBP13.49□□□□□ -0.25
TVP23B-202ENST00000476139 ST6GALNAC6Q969X2 333 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 PYGO2Q9BRQ0 406 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 KAAG1Q9UBP8 84 aa13.49□□□□□ -0.25
TVP23B-202ENST00000476139 A0A1B0GUS0 222 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 STAG3L2P0CL84 134 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 STAG3L3P0CL85 134 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 CASP6P55212 293 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 NABP2Q9BQ15 211 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 LY6HO94772 140 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 IGHV1-8P0DP01 117 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 TMEM155Q4W5P6 130 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 UNQ6494/PRO21346Q6UXR6 183 aa13.48□□□□□ -0.25
TVP23B-202ENST00000476139 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
TVP23B-202ENST00000476139 ZNF320A2RRD8 509 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 AMBPP02760 352 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 COMMD5Q9GZQ3 224 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 HIST1H1BP16401 226 aaKnown RBP13.47□□□□□ -0.25
TVP23B-202ENST00000476139 RPL8P62917 257 aaKnown RBP13.47□□□□□ -0.25
TVP23B-202ENST00000476139 OR4C13Q8NGP0 309 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 NDUFA4L2Q9NRX3 87 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 LINC00869P0C866 280 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 TMEM183AQ8IXX5 376 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 ANAPC16Q96DE5 110 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 TPSG1Q9NRR2 321 aa13.47□□□□□ -0.25
TVP23B-202ENST00000476139 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
TVP23B-202ENST00000476139 IGHV3-48P01763 117 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms