RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 A0A0G2JLM5 398 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 HELTA6NFD8 242 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 DKK1O94907 266 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 CRYBB3P26998 211 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 GPR183P32249 361 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 ARL4DP49703 201 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 BRWD1-AS2P59051 145 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 RPL30P62888 115 aaKnown RBP8.74□□□□□ -1.01
ABCF1-205ENST00000475993 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
ABCF1-205ENST00000475993 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
ABCF1-205ENST00000475993 PDLIM3Q53GG5 364 aaPredicted RBP8.74□□□□□ -1.01
ABCF1-205ENST00000475993 RASL11AQ6T310 242 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 PQLC2Q6ZP29 291 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 SPATA25Q9BR10 227 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 SRSF8Q9BRL6 282 aaKnown RBP8.74□□□□□ -1.01
ABCF1-205ENST00000475993 B4GALT7Q9UBV7 327 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 PCBD1P61457 104 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 PARM1Q6UWI2 310 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 ZNF645Q8N7E2 425 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 ZBTB34Q8NCN2 500 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 ZNF488Q96MN9 340 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 YAE1D1Q9NRH1 226 aa8.74□□□□□ -1.01
ABCF1-205ENST00000475993 UNC13CQ8NB66 2214 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 NEURL1O76050 574 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 HTR1DP28221 377 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 CFHR2P36980 270 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 GAGE5Q13069 117 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 GAGE6Q13070 117 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 FOXE3Q13461 319 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 FAM120AOSQ5T036 256 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 C17orf82Q86X59 251 aaPredicted RBP8.73□□□□□ -1.01
ABCF1-205ENST00000475993 OR5A1Q8NGJ0 315 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 VSTM2AQ8TAG5 236 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 C5orf30Q96GV9 206 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 FOXB1Q99853 325 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 SAP30LQ9HAJ7 183 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 SCRT2Q9NQ03 307 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 ZNF331Q9NQX6 463 aaPredicted RBP8.73□□□□□ -1.01
ABCF1-205ENST00000475993 MED12LQ86YW9 2145 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 H0Y8G0 127 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 J3QR89 54 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 EFNB3Q15768 340 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 ADAMTSL5Q6ZMM2 481 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 UBALD1Q8TB05 177 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 GALMQ96C23 342 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 HARBI1Q96MB7 349 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 KCNIP1Q9NZI2 227 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 ZNF835Q9Y2P0 537 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 CHCHD2Q9Y6H1 151 aaPredicted RBP8.73□□□□□ -1.01
ABCF1-205ENST00000475993 EML6Q6ZMW3 1958 aa8.73□□□□□ -1.01
ABCF1-205ENST00000475993 TNRC6BQ9UPQ9 1833 aaKnown RBP8.72□□□□□ -1.01
ABCF1-205ENST00000475993 IGLV3-12A0A075B6K2 115 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 FOXH1O75593 365 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 ZFAND5O76080 213 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 IGLV2-8P01709 118 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 TMPRSS3P57727 454 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 SSBP2P81877 361 aaPredicted RBP8.72□□□□□ -1.01
ABCF1-205ENST00000475993 TIGITQ495A1 244 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
ABCF1-205ENST00000475993 SLC35E4Q6ICL7 350 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 RNASEKQ6P5S7 137 aaKnown RBP8.72□□□□□ -1.01
ABCF1-205ENST00000475993 ZNF497Q6ZNH5 498 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 SRXN1Q9BYN0 137 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 MBNL3Q9NUK0 354 aaKnown RBP8.72□□□□□ -1.01
ABCF1-205ENST00000475993 HILPDAQ9Y5L2 63 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 USF3Q68DE3 2245 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 KMT2EQ8IZD2 1858 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 ESPL1Q14674 2120 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 ABCA7Q8IZY2 2146 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 TMEM265A0A087WTH1 108 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 A0A0J9YW62 118 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 C17orf98A8MV24 154 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 PRSS46E5RG02 174 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 GABRG2P18507 467 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 Q6P435 159 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 SPXQ9BT56 116 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 MS4A5Q9H3V2 200 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 C12orf49Q9H741 205 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 CLCF1Q9UBD9 225 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 TRAPPC2LQ9UL33 140 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 CHD9Q3L8U1 2897 aa8.72□□□□□ -1.01
ABCF1-205ENST00000475993 C3orf80F5H4A9 247 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 H3BRM9 83 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 OR2J3O76001 311 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.01
ABCF1-205ENST00000475993 HIST1H1EP10412 219 aaKnown RBP8.71□□□□□ -1.01
ABCF1-205ENST00000475993 SEC11AP67812 179 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 SLC23A3Q6PIS1 610 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 ZNF418Q8TF45 676 aaPredicted RBP8.71□□□□□ -1.01
ABCF1-205ENST00000475993 C1orf159Q96HA4 380 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 URB1-AS1Q96HZ7 61 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 CACNA1DQ01668 2161 aa8.71□□□□□ -1.01
ABCF1-205ENST00000475993 ASCC3Q8N3C0 2202 aaKnown RBP8.71□□□□□ -1.01
ABCF1-205ENST00000475993 TMEM189A5PLL7 270 aa8.71□□□□□ -1.02
ABCF1-205ENST00000475993 C5orf67F2Z3F1 127 aa8.71□□□□□ -1.02
ABCF1-205ENST00000475993 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms