RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 DAD1P61803 113 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 ZNF85Q03923 595 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 TMEM244Q5VVB8 128 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 TCF24Q7RTU0 167 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 ARPINQ7Z6K5 226 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 CROCCP3Q8IVE0 287 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 PARP16Q8N5Y8 322 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 NHLRC2Q8NBF2 726 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 TMEM116Q8NCL8 245 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 ST8SIA2Q92186 375 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 PHYHIPQ92561 330 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 BORCS5Q969J3 196 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 C12orf57Q99622 126 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 TM2D1Q9BX74 207 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 ARL8BQ9NVJ2 186 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 GMPPBQ9Y5P6 360 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 PEX16Q9Y5Y5 336 aa3.23□□□□□ -1.89
USP4-209ENST00000475873 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 IGHV3-21A0A0B4J1V1 117 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 IGHV3-66A0A0C4DH42 116 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 IGKV1-6A0A0C4DH72 117 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 TMEM189A5PLL7 270 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 DPPA5A6NC42 116 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 LRCOL1A6NCL2 159 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 K7EQG2 157 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 K7EQM0 130 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 CTDSP2O14595 271 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 SULT1C4O75897 302 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 FCER2P06734 321 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 OSMP13725 252 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 NQO2P16083 231 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 UCP1P25874 307 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 AP2S1P53680 142 aaPredicted RBP3.22□□□□□ -1.89
USP4-209ENST00000475873 TAS2R60P59551 318 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 OR2B8PP59922 312 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 MAGOHP61326 146 aaKnown RBP3.22□□□□□ -1.89
USP4-209ENST00000475873 EFNB1P98172 346 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 FLI1Q01543 452 aaPredicted RBP3.22□□□□□ -1.89
USP4-209ENST00000475873 ZIK1Q3SY52 487 aaPredicted RBP3.22□□□□□ -1.89
USP4-209ENST00000475873 TOR2AQ5JU69 321 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 GLT8D1Q68CQ7 371 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 ZNF880Q6PDB4 577 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 GSG1LQ6UXU4 331 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 LRRTM1Q86UE6 522 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 LHFPL3Q86UP9 236 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 SLC25A42Q86VD7 318 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 ADGRG5Q8IZF4 528 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 HS3ST5Q8IZT8 346 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 VKORC1L1Q8N0U8 176 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 CBR4Q8N4T8 237 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 SVOPQ8N4V2 548 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 OR10G2Q8NGC3 310 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 PTX4Q96A99 478 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 TLCD1Q96CP7 247 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 ORAI1Q96D31 301 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 OR10C1Q96KK4 312 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 CXorf58Q96LI9 332 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 GPER1Q99527 375 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 SDHAF2Q9NX18 166 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 TAS2R4Q9NYW5 299 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 TVP23BQ9NYZ1 205 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 KCNIP1Q9NZI2 227 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 STEAP1Q9UHE8 339 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 GNG8Q9UK08 70 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 HSF4Q9ULV5 492 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 MRPS16Q9Y3D3 137 aaKnown RBP3.22□□□□□ -1.89
USP4-209ENST00000475873 RFNGQ9Y644 331 aa3.22□□□□□ -1.89
USP4-209ENST00000475873 TRAV2A0A0B4J234 112 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 A0A0G2JND7 137 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 TEX48A0A1B0GUV7 120 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 A0A1W2PPV4 95 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 IGLC7A0M8Q6 106 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 PLAC8L1A1L4L8 177 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 LINC00473A8K010 186 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 F5H768 121 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 F8WDY8 70 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 M0QYG6 137 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 CA11O75493 328 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 ATP6V1G2O95670 118 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 C1QBP02746 253 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 CTSGP08311 255 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 ATP6V1B2P21281 511 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 BDKRB2P30411 391 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 TALDO1P37837 337 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 FXYD7P58549 80 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 AP3S2P59780 193 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 DEFB1P60022 68 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 UBE2G2P60604 165 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 CLINT1Q14677 625 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 CDK10Q15131 360 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 FCN2Q15485 313 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 VMA21Q3ZAQ7 101 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 C1orf158Q8N1D5 194 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 CCDC197Q8NCU1 140 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 DCANP1Q8TF63 244 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 RAB24Q969Q5 203 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 MCUR1Q96AQ8 359 aa3.21□□□□□ -1.9
USP4-209ENST00000475873 SAT2Q96F10 170 aaPredicted RBP3.21□□□□□ -1.9
USP4-209ENST00000475873 BSCL2Q96G97 398 aaPredicted RBP3.21□□□□□ -1.9
USP4-209ENST00000475873 IL4I1Q96RQ9 567 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms