RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ZNF680Q8NEM1 530 aa9.78□□□□□ -0.84
MRPL55-227ENST00000475832 SCGB1C1Q8TD33 95 aa9.78□□□□□ -0.84
MRPL55-227ENST00000475832 C17orf50Q8WW18 174 aa9.78□□□□□ -0.84
MRPL55-227ENST00000475832 BTBD17A6NE02 478 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 CYB5BO43169 146 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 CD5LO43866 347 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 CA2P00918 260 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 IFITM2Q01629 132 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 KLF17Q5JT82 389 aaPredicted RBP9.77□□□□□ -0.85
MRPL55-227ENST00000475832 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
MRPL55-227ENST00000475832 ETV3LQ6ZN32 361 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 ABHD5Q8WTS1 349 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 SCARB1Q8WTV0 552 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 TMEM158Q8WZ71 300 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 GNPNAT1Q96EK6 184 aaPredicted RBP9.77□□□□□ -0.85
MRPL55-227ENST00000475832 AJUBAQ96IF1 538 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 OR4C12Q96R67 309 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 SSX3Q99909 188 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 GGACTQ9BVM4 153 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 TPSG1Q9NRR2 321 aa9.77□□□□□ -0.85
MRPL55-227ENST00000475832 M0QZK8 103 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 AVPP01185 164 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 OR13C7P0DN81 318 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 MYOD1P15172 320 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 HNF1AP20823 631 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 PAX6P26367 422 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 PJVKQ0ZLH3 352 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 SCGB2A2Q13296 93 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 EXOSC2Q13868 293 aaKnown RBP9.76□□□□□ -0.85
MRPL55-227ENST00000475832 FAM120AOSQ5T036 256 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 ZNF562Q6V9R5 426 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 C16orf82Q7Z2V1 217 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 OR1L6Q8NGR2 347 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 LRRC20Q8TCA0 184 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 UQCC1Q9NVA1 299 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 MOB4Q9Y3A3 225 aa9.76□□□□□ -0.85
MRPL55-227ENST00000475832 SONP18583 2426 aaKnown RBP9.76□□□□□ -0.85
MRPL55-227ENST00000475832 CUBNO60494 3623 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 C15orf62A8K5M9 175 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 FGF16O43320 207 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 FXYD3Q14802 87 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 C2orf83Q53S99 150 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 C9orf139Q6ZV77 190 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 SRSF12Q8WXF0 261 aaKnown RBP9.75□□□□□ -0.85
MRPL55-227ENST00000475832 ARPC1AQ92747 370 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 RBMXL1Q96E39 390 aaKnown RBP9.75□□□□□ -0.85
MRPL55-227ENST00000475832 RBM14Q96PK6 669 aaKnown RBP9.75□□□□□ -0.85
MRPL55-227ENST00000475832 SLC25A33Q9BSK2 321 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 ARHGAP32A7KAX9 2087 aa9.75□□□□□ -0.85
MRPL55-227ENST00000475832 H3BUX3 64 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 CORTO00230 105 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 HLA-DRB1P01911 266 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 SRP14P37108 136 aaKnown RBP9.74□□□□□ -0.85
MRPL55-227ENST00000475832 DLK1P80370 383 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 C10orf55Q5SWW7 151 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 ETFRF1Q6IPR1 90 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 ALKAL2Q6UX46 152 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 OR5R1Q8NH85 324 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
MRPL55-227ENST00000475832 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
MRPL55-227ENST00000475832 GINS3Q9BRX5 216 aa9.74□□□□□ -0.85
MRPL55-227ENST00000475832 PARD6GQ9BYG4 376 aaPredicted RBP9.74□□□□□ -0.85
MRPL55-227ENST00000475832 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 C17orf112F2Z3M2 114 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 FCN1O00602 326 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 MPDU1O75352 247 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 FSHBP01225 129 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 RNASE2P10153 161 aaKnown RBP9.73□□□□□ -0.85
MRPL55-227ENST00000475832 DEFA4P12838 97 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 RAB31Q13636 194 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 Q8N9W7 124 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 HSD17B11Q8NBQ5 300 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 RNF141Q8WVD5 230 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 SSMEM1Q8WWF3 244 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 C22orf15Q8WYQ4 148 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 SLC25A32Q9H2D1 315 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 WFDC1Q9HC57 220 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
MRPL55-227ENST00000475832 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.73□□□□□ -0.851e-7■■■■□ 24.2
MRPL55-227ENST00000475832 UBE2L5PA0A1B0GUS4 154 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 SOX15O60248 233 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 CRLF1O75462 422 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 CFDP00746 253 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-227ENST00000475832 GPX4P36969 197 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-227ENST00000475832 RAB5CP51148 216 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 CX3CL1P78423 397 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 WT1-ASQ06250 92 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 ARL16Q0P5N6 197 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 MRGPRG-AS1Q2M3A8 158 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 TUSC1Q2TAM9 212 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 DEFB112Q30KQ8 113 aa9.72□□□□□ -0.85
MRPL55-227ENST00000475832 BSXQ3C1V8 233 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms