RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 DNAH10Q8IVF4 4471 aa18.36■□□□□ 0.53
TMEM54-205ENST00000475208 C6orf62Q9GZU0 229 aaPredicted RBP18.36■□□□□ 0.53
TMEM54-205ENST00000475208 EHFQ9NZC4 300 aa18.36■□□□□ 0.53
TMEM54-205ENST00000475208 OR51B2Q9Y5P1 312 aa18.36■□□□□ 0.53
TMEM54-205ENST00000475208 FCAMRQ8WWV6 532 aa18.35■□□□□ 0.53
TMEM54-205ENST00000475208 RNF2Q99496 336 aa18.35■□□□□ 0.53
TMEM54-205ENST00000475208 IFT46Q9NQC8 304 aa18.35■□□□□ 0.53
TMEM54-205ENST00000475208 SMPXQ9UHP9 88 aa18.35■□□□□ 0.53
TMEM54-205ENST00000475208 LOC100506127A0A0U1RQW1 187 aa18.34■□□□□ 0.53
TMEM54-205ENST00000475208 PGLYRP1O75594 196 aaPredicted RBP18.34■□□□□ 0.53
TMEM54-205ENST00000475208 SNAPC5O75971 98 aa18.34■□□□□ 0.53
TMEM54-205ENST00000475208 KRASP01116 189 aa18.34■□□□□ 0.53
TMEM54-205ENST00000475208 ZNF124Q15973 351 aa18.34■□□□□ 0.53
TMEM54-205ENST00000475208 G6PCP35575 357 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 LPAR6P43657 344 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 LGALS9CQ6DKI2 356 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 MOB3AQ96BX8 217 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 ZNF414Q96IQ9 312 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 ZNF2Q9BSG1 426 aaPredicted RBP18.33■□□□□ 0.52
TMEM54-205ENST00000475208 RHPN1-AS1Q9BWJ2 59 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 CSTL1Q9H114 145 aa18.33■□□□□ 0.52
TMEM54-205ENST00000475208 IGHV7-4-1A0A0J9YVY3 117 aa18.32■□□□□ 0.52
TMEM54-205ENST00000475208 CHEK1O14757 476 aa18.32■□□□□ 0.52
TMEM54-205ENST00000475208 CTSGP08311 255 aa18.32■□□□□ 0.52
TMEM54-205ENST00000475208 TFPI2P48307 235 aa18.32■□□□□ 0.52
TMEM54-205ENST00000475208 RELQ04864 619 aaPredicted RBP18.32■□□□□ 0.52
TMEM54-205ENST00000475208 DGCR14Q96DF8 476 aaKnown RBP18.32■□□□□ 0.52
TMEM54-205ENST00000475208 TMEM56Q96MV1 263 aa18.32■□□□□ 0.52
TMEM54-205ENST00000475208 PRNDQ9UKY0 176 aa18.32■□□□□ 0.52
TMEM54-205ENST00000475208 HERC2O95714 4834 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 IGKV3-7A0A075B6H7 116 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 IGHV3-49A0A0A0MS15 119 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 MPTX1A8MV57 137 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 NUPL2O15504 423 aaKnown RBP18.31■□□□□ 0.52
TMEM54-205ENST00000475208 RFX2P48378 723 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 DHRS11Q6UWP2 260 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 CADM3Q8N126 398 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 TMEM116Q8NCL8 245 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 TSPAN14Q8NG11 270 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 GATAD1Q8WUU5 269 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 RARRES2Q99969 163 aa18.31■□□□□ 0.52
TMEM54-205ENST00000475208 DBX1A6NMT0 343 aa18.3■□□□□ 0.52
TMEM54-205ENST00000475208 YIF1AO95070 293 aa18.3■□□□□ 0.52
TMEM54-205ENST00000475208 OR1P1Q8NH06 330 aa18.3■□□□□ 0.52
TMEM54-205ENST00000475208 FXYD6Q9H0Q3 95 aa18.3■□□□□ 0.52
TMEM54-205ENST00000475208 XRCC3O43542 346 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 PMP2P02689 132 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 CMC4P56277 68 aaPredicted RBP18.29■□□□□ 0.52
TMEM54-205ENST00000475208 NANOS2P60321 138 aaKnown RBP18.29■□□□□ 0.52
TMEM54-205ENST00000475208 KCTD21Q4G0X4 260 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 CMTM1Q8IZ96 169 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 SLC25A46Q96AG3 418 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 MISP3Q96FF7 219 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 OR10C1Q96KK4 312 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 FKBP11Q9NYL4 201 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 FBXL17Q9UF56 701 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 ANAPC10Q9UM13 185 aa18.29■□□□□ 0.52
TMEM54-205ENST00000475208 C15orf61A6NNL5 157 aa18.28■□□□□ 0.52
TMEM54-205ENST00000475208 OR5H2Q8NGV7 314 aa18.28■□□□□ 0.52
TMEM54-205ENST00000475208 C11orf45Q8TAV5 145 aa18.28■□□□□ 0.52
TMEM54-205ENST00000475208 C11orf68Q9H3H3 251 aaKnown RBP18.28■□□□□ 0.52
TMEM54-205ENST00000475208 TMEM14BQ9NUH8 114 aa18.28■□□□□ 0.52
TMEM54-205ENST00000475208 I3L2K1 104 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 GPR31O00270 319 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 MFAP4P55083 255 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 TAS2R46P59540 309 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 NEDD8Q15843 81 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 GBGT1Q8N5D6 347 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 OR11H2Q8NH07 326 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 CMTM3Q96MX0 182 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 TSC22D3Q99576 134 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 MFFQ9GZY8 342 aa18.27■□□□□ 0.52
TMEM54-205ENST00000475208 IGHV3OR16-13A0A075B7E8 117 aa18.26■□□□□ 0.51
TMEM54-205ENST00000475208 IGHV3-74A0A0B4J1X5 117 aa18.26■□□□□ 0.51
TMEM54-205ENST00000475208 RBMS2Q15434 407 aaKnown RBP18.26■□□□□ 0.51
TMEM54-205ENST00000475208 FAM90A2PQ658T7 463 aa18.26■□□□□ 0.51
TMEM54-205ENST00000475208 S100A16Q96FQ6 103 aaKnown RBP18.26■□□□□ 0.51
TMEM54-205ENST00000475208 NXF2Q9GZY0 626 aaKnown RBP18.26■□□□□ 0.51
TMEM54-205ENST00000475208 TRAV14DV4A0A0A6YYC5 116 aa18.25■□□□□ 0.51
TMEM54-205ENST00000475208 TMEM127O75204 238 aa18.25■□□□□ 0.51
TMEM54-205ENST00000475208 IGHV3-48P01763 117 aa18.25■□□□□ 0.51
TMEM54-205ENST00000475208 PHLDA2Q53GA4 152 aa18.25■□□□□ 0.51
TMEM54-205ENST00000475208 TXN2Q99757 166 aa18.25■□□□□ 0.51
TMEM54-205ENST00000475208 VPS13DQ5THJ4 4388 aa18.25■□□□□ 0.51
TMEM54-205ENST00000475208 MT-CO2P00403 227 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 CA1P00915 261 aaPredicted RBP18.24■□□□□ 0.51
TMEM54-205ENST00000475208 IFNA4P05014 189 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 NAT1P18440 290 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 TAS2R20P59543 309 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 TMEM69Q5SWH9 247 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 TCF24Q7RTU0 167 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 OR6F1Q8NGZ6 308 aa18.24■□□□□ 0.51
TMEM54-205ENST00000475208 GNG7O60262 68 aa18.23■□□□□ 0.51
TMEM54-205ENST00000475208 PAFAH1B2P68402 229 aa18.23■□□□□ 0.51
TMEM54-205ENST00000475208 UBE2NLQ5JXB2 153 aa18.23■□□□□ 0.51
TMEM54-205ENST00000475208 HECTD4Q9Y4D8 3996 aa18.23■□□□□ 0.51
TMEM54-205ENST00000475208 DEFB4AO15263 64 aa18.22■□□□□ 0.51
TMEM54-205ENST00000475208 HRH1P35367 487 aa18.22■□□□□ 0.51
TMEM54-205ENST00000475208 ZNF114Q8NC26 417 aa18.22■□□□□ 0.51
TMEM54-205ENST00000475208 OR4A16Q8NH70 328 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms