RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
ATG4B-216ENST00000475195 LHFPL5Q8TAF8 219 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 EEF1AKMT3Q96AZ1 226 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 ATP6V0BQ99437 205 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 MCUBQ9NWR8 336 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 KCNIP3Q9Y2W7 256 aa12.57□□□□□ -0.4
ATG4B-216ENST00000475195 LSM4Q9Y4Z0 139 aaKnown RBP12.57□□□□□ -0.4
ATG4B-216ENST00000475195 MFSD2BA6NFX1 497 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 CYB5BO43169 146 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 IGLV1-51P01701 117 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 CLEC3BP05452 202 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 MECP2P51608 486 aaKnown RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 SUPT4H1P63272 117 aaKnown RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 BAK1Q16611 211 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 TRIM16LQ309B1 348 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 Q6ZRM9 215 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 OR2C3Q8N628 320 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 OR1P1Q8NH06 330 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 ZNF502Q8TBZ5 544 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 RBPMSQ93062 196 aaKnown RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 SDHCQ99643 169 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 SLC25A21Q9BQT8 299 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 HINT2Q9BX68 163 aa12.56□□□□□ -0.4
ATG4B-216ENST00000475195 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-216ENST00000475195 A0A0G2JRQ6 117 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 PPP5D1E7EU14 171 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 LGALS9O00182 355 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 CSN3P07498 182 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 AKR1C2P52895 323 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 TMEM187Q14656 261 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 PVRIGQ6DKI7 326 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 SLC25A24Q6NUK1 477 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 CLEC19AQ6UXS0 136 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
ATG4B-216ENST00000475195 RRNAD1Q96FB5 475 aaKnown RBP12.55□□□□□ -0.4
ATG4B-216ENST00000475195 A6NHS1 94 aa12.54□□□□□ -0.4
ATG4B-216ENST00000475195 OR2C1O95371 312 aa12.54□□□□□ -0.4
ATG4B-216ENST00000475195 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
ATG4B-216ENST00000475195 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
ATG4B-216ENST00000475195 OR52E5Q8NH55 327 aa12.54□□□□□ -0.4
ATG4B-216ENST00000475195 K7EIM0 57 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 IGHV3-23P01764 117 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 SPNP16150 400 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 ARL3P36405 182 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 ERHP84090 104 aaKnown RBP12.53□□□□□ -0.4
ATG4B-216ENST00000475195 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
ATG4B-216ENST00000475195 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 TMEM268Q5VZI3 342 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 ADAMTSL5Q6ZMM2 481 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-216ENST00000475195 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 S4R3C0 116 aa12.53□□□□□ -0.4
ATG4B-216ENST00000475195 COL7A1Q02388 2944 aa12.52□□□□□ -0.4
ATG4B-216ENST00000475195 HLA-AP01891 365 aaKnown RBP12.52□□□□□ -0.41
ATG4B-216ENST00000475195 AKR1C4P17516 323 aa12.52□□□□□ -0.41
ATG4B-216ENST00000475195 FCGR2BP31994 310 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-216ENST00000475195 GPR146Q96CH1 333 aa12.52□□□□□ -0.41
ATG4B-216ENST00000475195 PRR25Q96S07 402 aa12.52□□□□□ -0.41
ATG4B-216ENST00000475195 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
ATG4B-216ENST00000475195 NAP1L6A6NFF2 107 aa12.51□□□□□ -0.41
ATG4B-216ENST00000475195 F8W735 103 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-216ENST00000475195 I3L2K1 104 aa12.51□□□□□ -0.41
ATG4B-216ENST00000475195 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
ATG4B-216ENST00000475195 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-216ENST00000475195 PLEKHA3Q9HB20 300 aa12.51□□□□□ -0.41
ATG4B-216ENST00000475195 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
ATG4B-216ENST00000475195 A0A0B4J2A0 478 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 A8MWP6 167 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 TGOLN2O43493 480 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 IFNA17P01571 189 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 ANXA3P12429 323 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 GP9P14770 177 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 SPCS3P61009 180 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 BSXQ3C1V8 233 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 SLC35G3Q8N808 338 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 OR2K2Q8NGT1 345 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 BSCL2Q96G97 398 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-216ENST00000475195 TXN2Q99757 166 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 PDCD10Q9BUL8 212 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 ZNF436Q9C0F3 470 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-216ENST00000475195 SHPKQ9UHJ6 478 aa12.5□□□□□ -0.41
ATG4B-216ENST00000475195 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 C2orf70A6NJV1 201 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 GPR183P32249 361 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 SRPXP78539 464 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 RBMS2Q15434 407 aaKnown RBP12.49□□□□□ -0.41
ATG4B-216ENST00000475195 NMSQ5H8A3 153 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 SPSB3Q6PJ21 355 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 PLET1Q6UQ28 207 aa12.49□□□□□ -0.41
ATG4B-216ENST00000475195 LGI3Q8N145 548 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms