RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 C19orf35Q6ZS72 473 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 DUSP18Q8NEJ0 188 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 OR11H1Q8NG94 326 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 OR1N2Q8NGR9 330 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 C20orf85Q9H1P6 137 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 ZNF355PQ9NSJ1 428 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 PRR13Q9NZ81 148 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 DNAH3Q8TD57 4116 aa13.06□□□□□ -0.32
SCAF11-206ENST00000474828 C13orf42A0A1B0GVH6 325 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 PITX3O75364 302 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 PF4P02776 101 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 MFAP2P55001 183 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 SPCS3P61009 180 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 DHRS2Q13268 280 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 KPRPQ5T749 579 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-206ENST00000474828 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 OR1P1Q8NH06 330 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 ATP6V0BQ99437 205 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
SCAF11-206ENST00000474828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
SCAF11-206ENST00000474828 A0A1B0GU03 582 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 REG1AP05451 166 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
SCAF11-206ENST00000474828 VAMP1P23763 118 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 MZT2BQ6NZ67 158 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 LYG2Q86SG7 212 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 RCC1LQ96I51 464 aaKnown RBP13.04□□□□□ -0.32
SCAF11-206ENST00000474828 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 RANGRFQ9HD47 186 aaPredicted RBP13.04□□□□□ -0.32
SCAF11-206ENST00000474828 CACNG5Q9UF02 275 aa13.04□□□□□ -0.32
SCAF11-206ENST00000474828 IGHV4OR15-8A0A075B7B6 117 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 A0A087WW49 117 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 LINC01619G3V211 115 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 OR2J3O76001 311 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 NDUFB8O95169 186 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 IGHV3-11P01762 117 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 SULT1A3P0DMM9 295 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 SULT1A4P0DMN0 295 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 ATP5G2Q06055 141 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 SMCO1Q147U7 214 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 VN1R17PQ8TDU5 208 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 MITD1Q8WV92 249 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 DUX3Q96PT4 197 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 FBXL7Q9UJT9 491 aa13.03□□□□□ -0.32
SCAF11-206ENST00000474828 NOTCH1P46531 2555 aa13.02□□□□□ -0.32
SCAF11-206ENST00000474828 FAM240BA0A1B0GVZ2 78 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 CYB5BO43169 146 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 HLA-AP01891 365 aaKnown RBP13.02□□□□□ -0.33
SCAF11-206ENST00000474828 RNASE11Q8TAA1 199 aaKnown RBP13.02□□□□□ -0.33
SCAF11-206ENST00000474828 CXorf58Q96LI9 332 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 OR5B12Q96R08 314 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 PLEKHA3Q9HB20 300 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 NUDT15Q9NV35 164 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 THYN1Q9P016 225 aa13.02□□□□□ -0.33
SCAF11-206ENST00000474828 PEF1Q9UBV8 284 aaKnown RBP13.02□□□□□ -0.33
SCAF11-206ENST00000474828 IFNA17P01571 189 aa13.01□□□□□ -0.33
SCAF11-206ENST00000474828 DEFA4P12838 97 aa13.01□□□□□ -0.33
SCAF11-206ENST00000474828 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-206ENST00000474828 RAB25P57735 213 aa13.01□□□□□ -0.33
SCAF11-206ENST00000474828 ERHP84090 104 aaKnown RBP13.01□□□□□ -0.33
SCAF11-206ENST00000474828 DEFA5Q01523 94 aa13.01□□□□□ -0.33
SCAF11-206ENST00000474828 EXOSC2Q13868 293 aaKnown RBP13.01□□□□□ -0.33
SCAF11-206ENST00000474828 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-206ENST00000474828 ZNF502Q8TBZ5 544 aa13.01□□□□□ -0.33
SCAF11-206ENST00000474828 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
SCAF11-206ENST00000474828 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
SCAF11-206ENST00000474828 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 K7EIM0 57 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 TRBV12-3P01733 135 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 RNASE2P10153 161 aaKnown RBP13□□□□□ -0.33
SCAF11-206ENST00000474828 CD33P20138 364 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 ZP3P21754 424 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 TNFRSF9Q07011 255 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 COQ8AQ8NI60 647 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 DPF1Q92782 380 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 PDCD10Q9BUL8 212 aa13□□□□□ -0.33
SCAF11-206ENST00000474828 MFSD2BA6NFX1 497 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 F8W735 103 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-206ENST00000474828 I3L2K1 104 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 BMPR1BO00238 502 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 IL5P05113 134 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 H2AFB2P0C5Z0 115 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-206ENST00000474828 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 C4orf46Q504U0 113 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 NRARPQ7Z6K4 114 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 DLX4Q92988 240 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-206ENST00000474828 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
SCAF11-206ENST00000474828 TRAV6A0A075B6T7 132 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 GGNBP1Q5YKI7 109 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 SCARB1Q8WTV0 552 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms