RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SBSPONQ8IVN8 264 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 MARVELD1Q9BSK0 173 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
VARS-223ENST00000474643 C20orf85Q9H1P6 137 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 FKBP11Q9NYL4 201 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 SORL1Q92673 2214 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 FAM223BA6NKX1 122 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 E7EUB6 86 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 OR2J3O76001 311 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 ANXA3P12429 323 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 AREGP15514 252 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 PSMB6P28072 239 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 ATP5G2Q06055 141 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 EXOSC2Q13868 293 aaKnown RBP11.58□□□□□ -0.56
VARS-223ENST00000474643 PLET1Q6UQ28 207 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 FAM223AQ8IWN6 122 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 IL22RA2Q969J5 263 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 RRNAD1Q96FB5 475 aaKnown RBP11.58□□□□□ -0.56
VARS-223ENST00000474643 SEC22AQ96IW7 307 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
VARS-223ENST00000474643 TEX50A0A1B0GTY4 177 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 CYB5BO43169 146 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 PRAF2O60831 178 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 BRI3O95415 125 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 H2AFB2P0C5Z0 115 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 AKR1C4P17516 323 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 UCP1P25874 307 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 THOC7Q6I9Y2 204 aaKnown RBP11.57□□□□□ -0.56
VARS-223ENST00000474643 LCN12Q6JVE5 192 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 DYNLRB2Q8TF09 96 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 TMEM230Q96A57 120 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 TMEM222Q9H0R3 208 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 NUDT15Q9NV35 164 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 FBXL7Q9UJT9 491 aa11.57□□□□□ -0.56
VARS-223ENST00000474643 A0A1B0GW64 132 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 C15orf61A6NNL5 157 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 CDS2O95674 445 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 IL5P05113 134 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 HIST1H1BP16401 226 aaKnown RBP11.56□□□□□ -0.56
VARS-223ENST00000474643 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
VARS-223ENST00000474643 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
VARS-223ENST00000474643 TMED4Q7Z7H5 227 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 LRTM2Q8N967 370 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 NECAP1Q8NC96 275 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 OR10W1Q8NGF6 305 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 OR5B3Q8NH48 314 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 LSM10Q969L4 123 aaKnown RBP11.56□□□□□ -0.56
VARS-223ENST00000474643 SRSF8Q9BRL6 282 aaKnown RBP11.56□□□□□ -0.56
VARS-223ENST00000474643 PDCD10Q9BUL8 212 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 TMEM56-RWDD3S4R434 201 aa11.56□□□□□ -0.56
VARS-223ENST00000474643 DUXBA0A1W2PPF3 345 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 CGB1A6NKQ9 187 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 CRYGCP07315 174 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 CTRB1P17538 263 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 SUPT4H1P63272 117 aaKnown RBP11.55□□□□□ -0.56
VARS-223ENST00000474643 OXA1LQ15070 435 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 C15orf32Q32M92 178 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 CTRB2Q6GPI1 263 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 THYN1Q9P016 225 aa11.55□□□□□ -0.56
VARS-223ENST00000474643 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 A0A0B4J2A0 478 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 IGLC7A0M8Q6 106 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 SFT2D2O95562 160 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 IFNA17P01571 189 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 IGKV1-5P01602 117 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 TRBV12-3P01733 135 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 OR4E1P0C645 316 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 LYL1P12980 280 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 IZUMO4Q1ZYL8 232 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 FAM219AQ8IW50 185 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
VARS-223ENST00000474643 NDUFA4L2Q9NRX3 87 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 TMEM14BQ9NUH8 114 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 CACFD1Q9UGQ2 172 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 SHPKQ9UHJ6 478 aa11.54□□□□□ -0.56
VARS-223ENST00000474643 KMT2CQ8NEZ4 4911 aaKnown RBP11.54□□□□□ -0.56
VARS-223ENST00000474643 C9orf170A2RU37 121 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 SNRPGP15A8MWD9 76 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 INMT-MINDY4F8WBC2 141 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 IGHV3-23P01764 117 aa11.53□□□□□ -0.56
VARS-223ENST00000474643 DHRS2Q13268 280 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms