RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 OPRK1P41145 380 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 VDAC2P45880 294 aaPredicted RBP8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 UBA52P62987 128 aaKnown RBP8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 CLINT1Q14677 625 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 OPCMLQ14982 345 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 ATP6V1FQ16864 119 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 EIF5AL1Q6IS14 154 aaKnown RBP8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 UNQ5815/PRO19632Q6UWF5 114 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 OR10W1Q8NGF6 305 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 OR5C1Q8NGR4 320 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 MISP3Q96FF7 219 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 FAM103A1Q9BTL3 118 aaKnown RBP8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 GON7Q9BXV9 100 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 PLSCR3Q9NRY6 295 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 FBXL17Q9UF56 701 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 BAHCC1Q9P281 2608 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 TET2Q6N021 2002 aaPredicted RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 IGHV7-81A0A0B4J1V7 117 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 RNF222A6NCQ9 220 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 INS-IGF2F8WCM5 200 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 AP4M1O00189 453 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 ATP6V0E1O15342 81 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 JTBO76095 146 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 TPT1P13693 172 aaKnown RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 CXCL2P19875 107 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 AKR1C1Q04828 323 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 RAB31Q13636 194 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 EXOSC2Q13868 293 aaKnown RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 LGALSLQ3ZCW2 172 aaPredicted RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 C2orf83Q53S99 150 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 Q71RC1 249 aaPredicted RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 SGMS2Q8NHU3 365 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 PIFOQ8TCI5 191 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 RNASEH2CQ8TDP1 164 aaKnown RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF48Q96MX3 618 aaPredicted RBP8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 OR4C12Q96R67 309 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 ATP5SQ99766 215 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 PRDM13Q9H4Q3 707 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 MYO9AB2RTY4 2548 aa8.15□□□□□ -1.1
PRPF38A-202ENST00000474048 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 IGLC7A0M8Q6 106 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 C15orf62A8K5M9 175 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 TEX22C9J3V5 150 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 INAFM1C9JVW0 142 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 AREGP15514 252 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 HIST1H1BP16401 226 aaKnown RBP8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 PAX9P55771 341 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 SLC35B1P78383 322 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 NHLH2Q02577 135 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 WT1-ASQ06250 92 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 TMEM14EPQ6UXP3 125 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 ZNF709Q8N972 641 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 ZNF114Q8NC26 417 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 LFNGQ8NES3 379 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 OR1P1Q8NH06 330 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 OR2T6Q8NHC8 308 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 DUX5Q96PT3 197 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 HSPB9Q9BQS6 159 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 TMEM147Q9BVK8 224 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 F11RQ9Y624 299 aaKnown RBP8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
PRPF38A-202ENST00000474048 NOTCH2Q04721 2471 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 UBE2L5PA0A1B0GUS4 154 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 SH2D7A6NKC9 451 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 NPIPB5A8MRT5 1133 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 C17orf112F2Z3M2 114 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 TMEM50AO95807 157 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 FAM157CP0CG43 387 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 RNASE2P10153 161 aaKnown RBP8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 RPL15P61313 204 aaKnown RBP8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 DLK1P80370 383 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 AKIRIN2Q53H80 203 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 FBLN7Q53RD9 439 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 FAM110DQ8TAY7 271 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 P2RX4Q99571 388 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 WNT10AQ9GZT5 417 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 KCNIP2Q9NS61 270 aa8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 MAP1AP78559 2803 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 ASH1LQ9NR48 2969 aaKnown RBP8.13□□□□□ -1.11
PRPF38A-202ENST00000474048 TCF21O43680 179 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 FBXO24O75426 580 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 IFNA7P01567 189 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 IGHG2P01859 326 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 SLC16A13Q7RTY0 426 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 STPG2Q8N412 459 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 TTC9CQ8N5M4 171 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 OR5T1Q8NG75 326 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 GNPNAT1Q96EK6 184 aaPredicted RBP8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 SLA2Q9H6Q3 261 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 CSPG4Q6UVK1 2322 aa8.12□□□□□ -1.11
PRPF38A-202ENST00000474048 NAV3Q8IVL0 2385 aa8.11□□□□□ -1.11
PRPF38A-202ENST00000474048 CGB1A6NKQ9 187 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms