RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 OR4C12Q96R67 309 aa14.44□□□□□ -0.1
PTCD3-210ENST00000473829 ZMAT5Q9UDW3 170 aaKnown RBP14.44□□□□□ -0.1
PTCD3-210ENST00000473829 ZNF256Q9Y2P7 627 aaPredicted RBP14.44□□□□□ -0.1
PTCD3-210ENST00000473829 SPNP16150 400 aa14.43□□□□□ -0.1
PTCD3-210ENST00000473829 FAUP35544 74 aaKnown RBP14.43□□□□□ -0.1
PTCD3-210ENST00000473829 HSPE1P61604 102 aaKnown RBP14.43□□□□□ -0.1
PTCD3-210ENST00000473829 SUPT4H1P63272 117 aaKnown RBP14.43□□□□□ -0.1
PTCD3-210ENST00000473829 SLC25A24Q6NUK1 477 aa14.43□□□□□ -0.1
PTCD3-210ENST00000473829 Q6ZRM9 215 aa14.43□□□□□ -0.1
PTCD3-210ENST00000473829 SELENOHQ8IZQ5 122 aaKnown RBP14.43□□□□□ -0.1
PTCD3-210ENST00000473829 ZNF502Q8TBZ5 544 aa14.43□□□□□ -0.1
PTCD3-210ENST00000473829 ELOVL1Q9BW60 279 aa14.43□□□□□ -0.1
PTCD3-210ENST00000473829 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 GGCTO75223 188 aaKnown RBP14.42□□□□□ -0.1
PTCD3-210ENST00000473829 ATG12O94817 140 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 OR2C1O95371 312 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 CSN3P07498 182 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 EDN2P20800 178 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 ARL3P36405 182 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 DHODHQ02127 395 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 FAM209BQ5JX69 171 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 OR2C3Q8N628 320 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 RBPMSQ93062 196 aaKnown RBP14.42□□□□□ -0.1
PTCD3-210ENST00000473829 CXorf58Q96LI9 332 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 ZC4H2Q9NQZ6 224 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 SORL1Q92673 2214 aa14.42□□□□□ -0.1
PTCD3-210ENST00000473829 TRBV7-1A0A0A6YYK4 115 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 IGHV3-21A0A0B4J1V1 117 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 LY86O95711 162 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 IGLV1-51P01701 117 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 AKR1C4P17516 323 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 GPR183P32249 361 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 TMEM187Q14656 261 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 DEFB121Q5J5C9 76 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 TMEM268Q5VZI3 342 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 ZNF57Q68EA5 555 aaPredicted RBP14.41□□□□□ -0.1
PTCD3-210ENST00000473829 ADAMTSL5Q6ZMM2 481 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 SGPP2Q8IWX5 399 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 RNASE11Q8TAA1 199 aaKnown RBP14.41□□□□□ -0.1
PTCD3-210ENST00000473829 RRNAD1Q96FB5 475 aaKnown RBP14.41□□□□□ -0.1
PTCD3-210ENST00000473829 GALNT14Q96FL9 552 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 SCGB3A2Q96PL1 93 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 THYN1Q9P016 225 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 DNAH9Q9NYC9 4486 aa14.41□□□□□ -0.1
PTCD3-210ENST00000473829 K7EIM0 57 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 CLEC3BP05452 202 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 TATDN3Q17R31 274 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 ZNF114Q8NC26 417 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 OR1P1Q8NH06 330 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 VN1R17PQ8TDU5 208 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 DEDD2Q8WXF8 326 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 PLEKHA3Q9HB20 300 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 LSM4Q9Y4Z0 139 aaKnown RBP14.4□□□□□ -0.1
PTCD3-210ENST00000473829 TMEM56-RWDD3S4R434 201 aa14.4□□□□□ -0.1
PTCD3-210ENST00000473829 F8W735 103 aaPredicted RBP14.39□□□□□ -0.11
PTCD3-210ENST00000473829 CYB5BO43169 146 aa14.39□□□□□ -0.11
PTCD3-210ENST00000473829 TMED4Q7Z7H5 227 aa14.39□□□□□ -0.11
PTCD3-210ENST00000473829 SLC35G3Q8N808 338 aa14.39□□□□□ -0.11
PTCD3-210ENST00000473829 SCARB1Q8WTV0 552 aa14.39□□□□□ -0.11
PTCD3-210ENST00000473829 GPR146Q96CH1 333 aa14.39□□□□□ -0.11
PTCD3-210ENST00000473829 IFNA17P01571 189 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 GP9P14770 177 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 AARDQ4LEZ3 155 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 TRIQKQ629K1 86 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 GPHB5Q86YW7 130 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 FAM219AQ8IW50 185 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 SIGLEC8Q9NYZ4 499 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 PEMTQ9UBM1 199 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 CACNG5Q9UF02 275 aa14.38□□□□□ -0.11
PTCD3-210ENST00000473829 IGHV3-35A0A0C4DH35 117 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 OR2T8A6NH00 312 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 I3L2K1 104 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 LGALS9O00182 355 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 CCR6P51684 374 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 UNQ9165/PRO28630Q6UXU0 137 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 OR1L6Q8NGR2 347 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 IL22RA2Q969J5 263 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 MISP3Q96FF7 219 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 C21orf62Q9NYP8 219 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 KCNIP3Q9Y2W7 256 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 COL7A1Q02388 2944 aa14.37□□□□□ -0.11
PTCD3-210ENST00000473829 LINC00854A0A1B0GVQ3 168 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 IZUMO1RA6ND01 250 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 C2orf70A6NJV1 201 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 INS-IGF2F8WCM5 200 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 TGOLN2O43493 480 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 IL7P13232 177 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 HOXA1P49639 335 aaPredicted RBP14.36□□□□□ -0.11
PTCD3-210ENST00000473829 ERHP84090 104 aaKnown RBP14.36□□□□□ -0.11
PTCD3-210ENST00000473829 CACNG8Q8WXS5 425 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 ZNF414Q96IQ9 312 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 SLC25A21Q9BQT8 299 aaPredicted RBP14.36□□□□□ -0.11
PTCD3-210ENST00000473829 PDCD10Q9BUL8 212 aa14.36□□□□□ -0.11
PTCD3-210ENST00000473829 TMEM213A2RRL7 107 aa14.35□□□□□ -0.11
PTCD3-210ENST00000473829 A6NHS1 94 aa14.35□□□□□ -0.11
PTCD3-210ENST00000473829 A8MWP6 167 aa14.35□□□□□ -0.11
PTCD3-210ENST00000473829 IGHV3-48P01763 117 aa14.35□□□□□ -0.11
PTCD3-210ENST00000473829 RNASE2P10153 161 aaKnown RBP14.35□□□□□ -0.11
PTCD3-210ENST00000473829 BTCP35070 178 aa14.35□□□□□ -0.11
PTCD3-210ENST00000473829 INPP1P49441 399 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms