RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 HIST1H2BOP23527 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HLA-DMBP28068 263 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H2BBP33778 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 PPP1R2P41236 205 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 ZNF80P51504 273 aaPredicted RBP0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H2BDP58876 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 SNRPD2P62316 118 aaKnown RBP0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H2BCP62807 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H3AP68431 136 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HBA1P69905 142 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 H3F3AP84243 136 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 DR1Q01658 176 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 FADDQ13158 208 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 EDDM3AQ14507 147 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST2H2BEQ16778 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 TMEM155Q4W5P6 130 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.89□□□□□ -2.27
GINS1-202ENST00000473460 PPP1R2P3Q6NXS1 205 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 AAED1Q7RTV5 226 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 DEFB128Q7Z7B8 93 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 ANKRD29Q8N6D5 301 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 CLDN22Q8N7P3 220 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 OR51D1Q8NGF3 324 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H2BHQ93079 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 TOMM6Q96B49 74 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 CHMP6Q96FZ7 201 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 ZNF625Q96I27 306 aaPredicted RBP0.89□□□□□ -2.27
GINS1-202ENST00000473460 SCGB3A1Q96QR1 104 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H2BNQ99877 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 HIST1H2BMQ99879 126 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 NIPSNAP1Q9BPW8 284 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 C9orf16Q9BUW7 83 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 TRIM4Q9C037 500 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 YIPF3Q9GZM5 350 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 C20orf27Q9GZN8 174 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 MIXL1Q9H2W2 232 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 CKLFQ9UBR5 152 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 CHD2O14647 1828 aaKnown RBP0.89□□□□□ -2.27
GINS1-202ENST00000473460 FHAD1B1AJZ9 1412 aa0.89□□□□□ -2.27
GINS1-202ENST00000473460 ANKRD30AQ9BXX3 1397 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 TGIF2-C20orf24A0A0A6YYL0 155 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 TMEM210A6NLX4 147 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 C19orf84I3L1E1 186 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 J3QRK9 145 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 KPNA3O00505 521 aaPredicted RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 PIRO00625 290 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 CIAO1O76071 339 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 CRYZL1O95825 349 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 TCL1BO95988 128 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 PMP2P02689 132 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 CRPP02741 224 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 ANGP03950 147 aaKnown RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 PRB1P04280 392 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 HTR1AP08908 422 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 RBP1P09455 135 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 RPS4Y1P22090 263 aaKnown RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 CDKN2CP42773 168 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 EIF2B2P49770 351 aaKnown RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 ARPC4P59998 168 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 SNCBQ16143 134 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 IAH1Q2TAA2 248 aaPredicted RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 ARHGAP11BQ3KRB8 267 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 FAM27BQ5VT28 67 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 AADACL3Q5VUY0 350 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 DPPA3Q6W0C5 159 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 Q6ZRN7 208 aaPredicted RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 C7orf65Q6ZTY9 151 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 TRAPPC6BQ86SZ2 158 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 TMEM86BQ8N661 226 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 WFDC11Q8NEX6 87 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 OR4D11Q8NGI4 311 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 BTF3L4Q96K17 158 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 HSPB9Q9BQS6 159 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 GINS4Q9BRT9 223 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 DERL1Q9BUN8 251 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 MRPL32Q9BYC8 188 aaKnown RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 CCDC90BQ9GZT6 254 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 OR51V1Q9H2C8 321 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 FBXL12Q9NXK8 326 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 BAIAP2Q9UQB8 552 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 SLC22A13Q9Y226 551 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 SOX21Q9Y651 276 aaPredicted RBP0.88□□□□□ -2.27
GINS1-202ENST00000473460 CEP152O94986 1710 aa0.88□□□□□ -2.27
GINS1-202ENST00000473460 PCF11O94913 1555 aaKnown RBP0.87□□□□□ -2.27
GINS1-202ENST00000473460 REREQ9P2R6 1566 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 SCAF11Q99590 1463 aaKnown RBP0.87□□□□□ -2.27
GINS1-202ENST00000473460 ROCK1Q13464 1354 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 WDR97A6NE52 1622 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 IGKV2-40A0A087WW87 121 aaPredicted RBP0.87□□□□□ -2.27
GINS1-202ENST00000473460 TRBV6-5A0A0K0K1A5 114 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 DPRXA6NFQ7 191 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 OR4C46A6NHA9 309 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 CHP2O43745 196 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 MRPS14O60783 128 aaKnown RBP0.87□□□□□ -2.27
GINS1-202ENST00000473460 ATP5HO75947 161 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 IGKV2D-40P01614 121 aaPredicted RBP0.87□□□□□ -2.27
GINS1-202ENST00000473460 GPX2P18283 190 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 AQP4P55087 323 aa0.87□□□□□ -2.27
GINS1-202ENST00000473460 AP3S2P59780 193 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms