RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 DEFB114Q30KQ6 69 aa17.05■□□□□ 0.32
PTP4A1-203ENST00000473334 PLET1Q6UQ28 207 aa17.05■□□□□ 0.32
PTP4A1-203ENST00000473334 TMEM213A2RRL7 107 aa17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 TGOLN2O43493 480 aa17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 CTSDP07339 412 aaPredicted RBP17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 CBLN1P23435 193 aa17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 FAAP20Q6NZ36 180 aa17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 MARCH1Q8TCQ1 289 aa17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 CACNG8Q8WXS5 425 aa17.04■□□□□ 0.32
PTP4A1-203ENST00000473334 DISC1C4P0D8 188 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 ATG12O94817 140 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 AKAIN1P0CW23 69 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 AKR1C2P52895 323 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 PRCDQ00LT1 54 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 OR1P1Q8NH06 330 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 BSCL2Q96G97 398 aaPredicted RBP17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 RCHY1Q96PM5 261 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 ATP6V0BQ99437 205 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 PALMDQ9NP74 551 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 C21orf62Q9NYP8 219 aa17.03■□□□□ 0.32
PTP4A1-203ENST00000473334 IGHV3-21A0A0B4J1V1 117 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 K7EIM0 57 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 IGKV1-5P01602 117 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 HSPE1P61604 102 aaKnown RBP17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 TRIM16LQ309B1 348 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 UNQ9165/PRO28630Q6UXU0 137 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 OR2C3Q8N628 320 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 OR4C16Q8NGL9 310 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 ZNF436Q9C0F3 470 aaPredicted RBP17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 ZMAT4Q9H898 229 aa17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 RSL24D1Q9UHA3 163 aaKnown RBP17.02■□□□□ 0.32
PTP4A1-203ENST00000473334 TENM3Q9P273 2699 aa17.02■□□□□ 0.31
PTP4A1-203ENST00000473334 IGHV3-35A0A0C4DH35 117 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 OR2T8A6NH00 312 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 ZNF785A8K8V0 405 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 GSTZ1O43708 216 aaPredicted RBP17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 B3GALNT1O75752 331 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 P0C879 139 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 UCP1P25874 307 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 CD81P60033 236 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 IZUMO4Q1ZYL8 232 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 SPSB3Q6PJ21 355 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 ZNF114Q8NC26 417 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 MCFD2Q8NI22 146 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 SCARB1Q8WTV0 552 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 MARC2Q969Z3 335 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 SLC2A8Q9NY64 477 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 C14orf166Q9Y224 244 aaKnown RBP17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 UFC1Q9Y3C8 167 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 CEPT1Q9Y6K0 416 aa17.01■□□□□ 0.31
PTP4A1-203ENST00000473334 STAB2Q8WWQ8 2551 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 ELLP55199 621 aaPredicted RBP17■□□□□ 0.31
PTP4A1-203ENST00000473334 SURF2Q15527 256 aaPredicted RBP17■□□□□ 0.31
PTP4A1-203ENST00000473334 GUCA2BQ16661 112 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 SP6Q3SY56 376 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 TM4SF20Q53R12 229 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 ZNF57Q68EA5 555 aaPredicted RBP17■□□□□ 0.31
PTP4A1-203ENST00000473334 UXS1Q8NBZ7 420 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 NEURL2Q9BR09 285 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 TM2D3Q9BRN9 247 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 NXF2Q9GZY0 626 aaKnown RBP17■□□□□ 0.31
PTP4A1-203ENST00000473334 TUBA4BQ9H853 241 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 PLEKHA3Q9HB20 300 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 MLXQ9UH92 298 aa17■□□□□ 0.31
PTP4A1-203ENST00000473334 ANKRD20A5PA0PJZ0 165 aa16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 TNFSF8P32971 234 aa16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 ERHP84090 104 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 TMEM190Q8WZ59 177 aa16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 WDR89Q96FK6 387 aaPredicted RBP16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 PRRT1Q99946 306 aa16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 SOSTQ9BQB4 213 aa16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 RTBDNQ9BSG5 229 aaPredicted RBP16.99■□□□□ 0.31
PTP4A1-203ENST00000473334 A0A0B4J293 547 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 FABP12A6NFH5 140 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 F8W735 103 aaPredicted RBP16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 C8orf88P0DMB2 117 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 Q56UQ5 140 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 UBAC2Q8NBM4 344 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 RRNAD1Q96FB5 475 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 MISP3Q96FF7 219 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 GAR1Q9NY12 217 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 MRPL27Q9P0M9 148 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 SELENOKQ9Y6D0 94 aa16.98■□□□□ 0.31
PTP4A1-203ENST00000473334 CD7P09564 240 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 OR5AC1P0C628 307 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 SPINK9Q5DT21 86 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 BTNL8Q6UX41 500 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 TMEM61Q8N0U2 210 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 SLC35G3Q8N808 338 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 OR51S1Q8NGJ8 323 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 RNASE11Q8TAA1 199 aaKnown RBP16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 CHRDL1Q9BU40 450 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 PDCD10Q9BUL8 212 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 TMEM222Q9H0R3 208 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 C5orf66Q9H5L9 145 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 NAA60Q9H7X0 242 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 GPR132Q9UNW8 380 aa16.97■□□□□ 0.31
PTP4A1-203ENST00000473334 TEX13DA0A0J9YY54 714 aaPredicted RBP16.96■□□□□ 0.31
PTP4A1-203ENST00000473334 CCDC160A6NGH7 325 aa16.96■□□□□ 0.31
PTP4A1-203ENST00000473334 I3L2K1 104 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms