RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 RPEQ96AT9 228 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 R3HDM4Q96D70 268 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 RRNAD1Q96FB5 475 aaKnown RBP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 NARS2Q96I59 477 aaKnown RBP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 CXorf58Q96LI9 332 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 TBX15Q96SF7 602 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 FAM212BQ9NTI7 297 aaPredicted RBP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 CACNG5Q9UF02 275 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 GAB2Q9UQC2 676 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 LSM5Q9Y4Y9 91 aaKnown RBP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 MARCH11A6NNE9 402 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 RNASEK-C17orf49H0YIS7 233 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 BUB1B-PAK6H3BSN5 160 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 TXNL1O43396 289 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 GPR137BO60478 399 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 KRASP01116 189 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 CT45A6P0DMU7 189 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 CT45A5P0DMU8 189 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 CT45A7P0DMV0 189 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 GYPEP15421 78 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 CXCL2P19875 107 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 PVALBP20472 110 aaPredicted RBP5.09□□□□□ -1.59
HDAC1-205ENST00000472928 MALP21145 153 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 S100A11P31949 105 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 BRWD1-AS2P59051 145 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 RAB4BP61018 213 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 RAB32Q13637 225 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 SMCO1Q147U7 214 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 TPTE2P1Q5T6R2 138 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 RUSC1-AS1Q66K80 236 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 C1orf122Q6ZSJ8 110 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 Q6ZSV7 163 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 SSX9Q7RTT3 188 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 OR11H6Q8NGC7 330 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 OR4D5Q8NGN0 318 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 THAP6Q8TBB0 222 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 DCUN1D4Q92564 292 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 LHX4Q969G2 390 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 LSM10Q969L4 123 aaKnown RBP5.09□□□□□ -1.59
HDAC1-205ENST00000472928 ST6GALNAC6Q969X2 333 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 GPR146Q96CH1 333 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 HARBI1Q96MB7 349 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 NABP2Q9BQ15 211 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 PLEKHA2Q9HB19 425 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 AURKAIP1Q9NWT8 199 aaPredicted RBP5.09□□□□□ -1.59
HDAC1-205ENST00000472928 RCL1Q9Y2P8 373 aaKnown RBP5.09□□□□□ -1.59
HDAC1-205ENST00000472928 WASHC3Q9Y3C0 194 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 DMRT1Q9Y5R6 373 aa5.09□□□□□ -1.59
HDAC1-205ENST00000472928 IGHV3-72A0A0B4J1Y9 119 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 IGHV1-3A0A0C4DH29 117 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 A0A1B0GU03 582 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 A0A1W2PPI3 338 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 RAB19A4D1S5 217 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 C9orf118A6NHY6 69 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 K7EPK0 472 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 UBE2CO00762 179 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 ARPC5O15511 151 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 SSSCA1O60232 199 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 NDUFS6O75380 124 aaKnown RBP5.08□□□□□ -1.6
HDAC1-205ENST00000472928 RBMXL2O75526 392 aaKnown RBP5.08□□□□□ -1.6
HDAC1-205ENST00000472928 HPRT1P00492 218 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 MBPP02686 304 aaPredicted RBP5.08□□□□□ -1.6
HDAC1-205ENST00000472928 IGKV1-16P04430 117 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 P0C879 139 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 SLC25A6P12236 298 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 NQO2P16083 231 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 PAX6P26367 422 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 PSMB6P28072 239 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 HTR1DP28221 377 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 CEACAM3P40198 252 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 NKX2-1P43699 371 aaPredicted RBP5.08□□□□□ -1.6
HDAC1-205ENST00000472928 OR2B8PP59922 312 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 RPL15P61313 204 aaKnown RBP5.08□□□□□ -1.6
HDAC1-205ENST00000472928 DEFA5Q01523 94 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 GAGE13Q4V321 117 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 C10orf91Q5T1B1 145 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 TMUB2Q71RG4 321 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 H2BFWTQ7Z2G1 175 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 LHFPL4Q7Z7J7 247 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 MOB3BQ86TA1 216 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 PDPNQ86YL7 162 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 VKORC1L1Q8N0U8 176 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 SVBPQ8N300 66 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 FAM71E2Q8N5Q1 922 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 SSMEM1Q8WWF3 244 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 RBMXL1Q96E39 390 aaKnown RBP5.08□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM68Q96MH6 324 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 MAGT1Q9H0U3 335 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 C16orf95Q9H693 158 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 NIT2Q9NQR4 276 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM140Q9NV12 185 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 OR5AC2Q9NZP5 309 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 DPM3Q9P2X0 92 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 HILPDAQ9Y5L2 63 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 POMT1Q9Y6A1 747 aa5.08□□□□□ -1.6
HDAC1-205ENST00000472928 C5orf52A6NGY3 159 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 H0YIZ8 118 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 LY6LH3BQJ8 138 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 NPFFO15130 113 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms