RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SHBGP04278 402 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 CASQ1P31415 396 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 CCL20P78556 96 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 OGFRL1Q5TC84 451 aaPredicted RBP1.04□□□□□ -2.24
CLK1-209ENST00000472679 LCN15Q6UWW0 184 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 ALKAL1Q6UXT8 129 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 OR51D1Q8NGF3 324 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 AQP3Q92482 292 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 TRABDQ9H4I3 376 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 SNURFQ9Y675 71 aa1.04□□□□□ -2.24
CLK1-209ENST00000472679 TENM3Q9P273 2699 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 GRK1Q15835 563 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 AADACL3Q5VUY0 350 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 TEX36Q5VZQ5 186 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 CD200R1LQ6Q8B3 271 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 AAED1Q7RTV5 226 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 FAM19A2Q8N3H0 131 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 C12orf29Q8N999 325 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 WFDC11Q8NEX6 87 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 DERL1Q9BUN8 251 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 WDR61Q9GZS3 305 aaKnown RBP1.03□□□□□ -2.24
CLK1-209ENST00000472679 USE1Q9NZ43 259 aa1.03□□□□□ -2.24
CLK1-209ENST00000472679 COL4A5P29400 1685 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 TCL1AP56279 114 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 RAB5BP61020 215 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 UBE2IP63279 158 aaKnown RBP1.02□□□□□ -2.25
CLK1-209ENST00000472679 EXPH5Q8NEV8 1989 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 RASSF5Q8WWW0 418 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 TMEM106AQ96A25 262 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 OR5AC2Q9NZP5 309 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 TP73-AS1Q9UF72 201 aa1.02□□□□□ -2.25
CLK1-209ENST00000472679 PIK3R4Q99570 1358 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 IGKV1D-42A0A075B6H8 117 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 IGKV1-9A0A0C4DH69 117 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 IGKV1-5P01602 117 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 TPM3P06753 285 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 DMTNQ08495 405 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 CDK10Q15131 360 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 CMTM6Q9NX76 183 aa1.01□□□□□ -2.25
CLK1-209ENST00000472679 FKBP2P26885 142 aaKnown RBP1□□□□□ -2.25
CLK1-209ENST00000472679 PMAIP1Q13794 54 aa1□□□□□ -2.25
CLK1-209ENST00000472679 OR4C6Q8NH72 309 aa1□□□□□ -2.25
CLK1-209ENST00000472679 EIF4G1Q04637 1599 aaKnown RBP1□□□□□ -2.25
CLK1-209ENST00000472679 CETN3O15182 167 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 PRB4P10163 310 aaPredicted RBP0.99□□□□□ -2.25
CLK1-209ENST00000472679 TPM4P67936 248 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 STX5Q13190 355 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 Q6ZQT0 140 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 Q6ZS49 121 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 ZNF826PQ6ZT77 177 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 PFN4Q8NHR9 129 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 ANAPC1Q9H1A4 1944 aa0.99□□□□□ -2.25
CLK1-209ENST00000472679 TNRC6BQ9UPQ9 1833 aaKnown RBP0.99□□□□□ -2.25
CLK1-209ENST00000472679 C9orf84Q5VXU9 1444 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 OR5F1O95221 314 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 ISG15P05161 165 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 CTSDP07339 412 aaPredicted RBP0.98□□□□□ -2.25
CLK1-209ENST00000472679 CRYGAP11844 174 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BOP23527 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BBP33778 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 AP2S1P53680 142 aaPredicted RBP0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BDP58876 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BCP62807 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST2H2BEQ16778 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.98□□□□□ -2.25
CLK1-209ENST00000472679 BPIFA4PQ86YQ2 179 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 MRPL30Q8TCC3 161 aaKnown RBP0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BHQ93079 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BNQ99877 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 HIST1H2BMQ99879 126 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 NKIRAS1Q9NYS0 192 aa0.98□□□□□ -2.25
CLK1-209ENST00000472679 A0A1B0GV50 99 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 EEF1E1-BLOC1S5C9J1V9 151 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 TGOLN2O43493 480 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 FADS1O60427 444 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 IFITM2Q01629 132 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 CDKL4Q5MAI5 379 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 LPCAT4Q643R3 524 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 TMEM86BQ8N661 226 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 PTH2Q96A98 100 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 OPTNQ96CV9 577 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 SLC50A1Q9BRV3 221 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 CKLFQ9UBR5 152 aa0.97□□□□□ -2.25
CLK1-209ENST00000472679 C19orf84I3L1E1 186 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 HTR1AP08908 422 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 SPI1P17947 270 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 IQCF2Q8IXL9 164 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 MCFD2Q8NI22 146 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 SLC35B4Q969S0 331 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 OBSCN-AS1Q96MR7 158 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 SCGB3A1Q96QR1 104 aa0.96□□□□□ -2.26
CLK1-209ENST00000472679 FUOMA2VDF0 154 aa0.95□□□□□ -2.26
CLK1-209ENST00000472679 OR5G3P0C626 314 aa0.95□□□□□ -2.26
CLK1-209ENST00000472679 ASAH2BP0C7U1 165 aa0.95□□□□□ -2.26
CLK1-209ENST00000472679 SPANXN3Q5MJ09 141 aa0.95□□□□□ -2.26
CLK1-209ENST00000472679 RPL22L1Q6P5R6 122 aaKnown RBP0.95□□□□□ -2.26
CLK1-209ENST00000472679 CLVS1Q8IUQ0 354 aaPredicted RBP0.95□□□□□ -2.26
CLK1-209ENST00000472679 C1orf158Q8N1D5 194 aa0.95□□□□□ -2.26
CLK1-209ENST00000472679 A0A087WX48 190 aa0.94□□□□□ -2.26
CLK1-209ENST00000472679 TGIF2-C20orf24A0A0A6YYL0 155 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms