RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ACTG1P63261 375 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 UBE2IP63279 158 aaKnown RBP1.79□□□□□ -2.12
SGCE-210ENST00000472326 TPM4P67936 248 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 COTL1Q14019 142 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 Q6ZS92 163 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 ZFAND2AQ8N6M9 145 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 OR52E4Q8NGH9 312 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 ERMNQ8TAM6 284 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 ZNF514Q96K75 400 aaPredicted RBP1.79□□□□□ -2.12
SGCE-210ENST00000472326 ZNF426Q9BUY5 554 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 ULBP3Q9BZM4 244 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 SPANXB1Q9NS25 103 aaPredicted RBP1.79□□□□□ -2.12
SGCE-210ENST00000472326 FBXL3Q9UKT7 428 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 ATP6V1DQ9Y5K8 247 aa1.79□□□□□ -2.12
SGCE-210ENST00000472326 NCOA6Q14686 2063 aaPredicted RBP1.79□□□□□ -2.12
SGCE-210ENST00000472326 DYNC2H1Q8NCM8 4307 aaKnown RBP1.79□□□□□ -2.12
SGCE-210ENST00000472326 TENM3Q9P273 2699 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 A0A0A6YYH2 397 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 SPTY2D1-AS1A0A0U1RR47 76 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 GOLGA6L10A6NI86 522 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 A6NJ64 397 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 C21orf140B9A014 251 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 C9J4A7 227 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 J3QLI3 93 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 LIN7AO14910 233 aaPredicted RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 PIN1P1O15428 100 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 FGF16O43320 207 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 COCHO43405 550 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 NDUFS6O75380 124 aaKnown RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 SNAP29O95721 258 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 ORM1P02763 201 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 LIMS3P0CW19 117 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 LIMS4P0CW20 117 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 KCNE1P15382 129 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 HIST1H1CP16403 213 aaKnown RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 HSPA13P48723 471 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 AQP5P55064 265 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 MP68P56378 58 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 FAM3AP98173 230 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 RAB31Q13636 194 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 PAFAH1B3Q15102 231 aaKnown RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 CLEC12BQ2HXU8 276 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 GKN2Q86XP6 184 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 SUN5Q8TC36 379 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 DDI1Q8WTU0 396 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 CT55Q8WUE5 264 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 LLPHQ9BRT6 129 aaKnown RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 TCEAL2Q9H3H9 227 aaPredicted RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 UBQLN4Q9NRR5 601 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 IMP3Q9NV31 184 aaKnown RBP1.78□□□□□ -2.12
SGCE-210ENST00000472326 NKIRAS1Q9NYS0 192 aa1.78□□□□□ -2.12
SGCE-210ENST00000472326 USF3Q68DE3 2245 aa1.78□□□□□ -2.13
SGCE-210ENST00000472326 TRPM6Q9BX84 2022 aa1.78□□□□□ -2.13
SGCE-210ENST00000472326 TCHHQ07283 1943 aa1.78□□□□□ -2.13
SGCE-210ENST00000472326 DNAH1Q9P2D7 4330 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 SIGLEC16A6NMB1 481 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 F5H5K5 113 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 SULT1C2O00338 296 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 TNFAIP8O95379 198 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 AHSA1O95433 338 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 SOD1P00441 154 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 INPP1P49441 399 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 RPL14P50914 215 aaKnown RBP1.77□□□□□ -2.13
SGCE-210ENST00000472326 RWDD2BP57060 319 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 RAB8AP61006 207 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 UBE2KP61086 200 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 MAGOHP61326 146 aaKnown RBP1.77□□□□□ -2.13
SGCE-210ENST00000472326 ALX1Q15699 326 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 OR10J3Q5JRS4 329 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 ALKAL1Q6UXT8 129 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 LFNGQ8NES3 379 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 OR5L1Q8NGL2 311 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 MRAP2Q96G30 205 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 TAPBPLQ9BX59 468 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 EBPLQ9BY08 206 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 IFT46Q9NQC8 304 aa1.77□□□□□ -2.13
SGCE-210ENST00000472326 HRNRQ86YZ3 2850 aaPredicted RBP1.77□□□□□ -2.13
SGCE-210ENST00000472326 YLPM1P49750 1951 aaKnown RBP1.76□□□□□ -2.13
SGCE-210ENST00000472326 TRAV8-2A0A0B4J237 113 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 C1orf232A0A0U1RR37 186 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 C10orf142B7Z368 130 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 FTCDNL1E5RQL4 147 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 OR4A8P0C604 315 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 AKR1C4P17516 323 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 ATF1P18846 271 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 SYT1P21579 422 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 CA5AP35218 305 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 DLX6P56179 175 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 ZNF117Q03924 483 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 TFF3Q07654 80 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 SLC36A2Q495M3 483 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 CCDC122Q5T0U0 273 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 FAM45BPQ6NSW5 357 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 MTERF4Q7Z6M4 381 aaKnown RBP1.76□□□□□ -2.13
SGCE-210ENST00000472326 SLC13A5Q86YT5 568 aaPredicted RBP1.76□□□□□ -2.13
SGCE-210ENST00000472326 LXNQ9BS40 222 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 SPZ1Q9BXG8 430 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 XPNPEP1Q9NQW7 623 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 COL7A1Q02388 2944 aa1.76□□□□□ -2.13
SGCE-210ENST00000472326 ABCA1O95477 2261 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms