RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CGB1A6NKQ9 187 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 SSSCA1O60232 199 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 CRYGCP07315 174 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 ELANEP08246 267 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
CCM2-205ENST00000472223 RPL23AP62750 156 aaKnown RBP13.23□□□□□ -0.29
CCM2-205ENST00000472223 WT1-ASQ06250 92 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 FGL1Q08830 312 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 SLC25A24Q6NUK1 477 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 OR2C3Q8N628 320 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 WNT10AQ9GZT5 417 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 C2CD3Q4AC94 2353 aa13.23□□□□□ -0.29
CCM2-205ENST00000472223 hCG_2014768A0A024R1R8 64 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 CORTO00230 105 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 FBXO24O75426 580 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 IGHG4P01861 327 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 MBPP02686 304 aaPredicted RBP13.22□□□□□ -0.29
CCM2-205ENST00000472223 IAPPP10997 89 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 CTRB1P17538 263 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 CXCL3P19876 107 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 PPIFP30405 207 aaKnown RBP13.22□□□□□ -0.29
CCM2-205ENST00000472223 H2BFSP57053 126 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 POLR2GP62487 172 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCM2-205ENST00000472223 RAB11AP62491 216 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 FOXE3Q13461 319 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 CTRB2Q6GPI1 263 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 SLC24A4Q8NFF2 622 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 OR11H7Q8NGC8 314 aa13.22□□□□□ -0.29
CCM2-205ENST00000472223 PAIP2BQ9ULR5 123 aaKnown RBP13.22□□□□□ -0.29
CCM2-205ENST00000472223 A0A0G2JLM5 398 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 A0A1B0GW64 132 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 TRGV3P03979 118 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 GIPP09681 153 aaPredicted RBP13.21□□□□□ -0.29
CCM2-205ENST00000472223 BCAP31P51572 246 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 PROK1P58294 105 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 TPPP2P59282 170 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 RAP2BP61225 183 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 RAB32Q13637 225 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 LRRC37A5PQ49AS3 106 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 AWAT1Q58HT5 328 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 C12orf54Q6X4T0 127 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 THAP6Q8TBB0 222 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 MS4A10Q96PG2 267 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 PSENENQ9NZ42 101 aa13.21□□□□□ -0.29
CCM2-205ENST00000472223 RCL1Q9Y2P8 373 aaKnown RBP13.21□□□□□ -0.29
CCM2-205ENST00000472223 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.29
CCM2-205ENST00000472223 K7EPK0 472 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 IGLV1-40P01703 118 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 NPY1RP25929 384 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 TAS2R30P59541 319 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 CFHR3Q02985 330 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 KHDC1LQ5JSQ8 128 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 ZNF114Q8NC26 417 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 PPP1R1CQ8WVI7 109 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 SMIM8Q96KF7 97 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 P2RX4Q99571 388 aa13.2□□□□□ -0.3
CCM2-205ENST00000472223 STRAPQ9Y3F4 350 aaKnown RBP13.2□□□□□ -0.3
CCM2-205ENST00000472223 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 BRI3O95415 125 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 IFNA4P05014 189 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 OR8U8P0C7N1 319 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 RAB9AP51151 201 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 SRSF4Q08170 494 aaKnown RBP13.19□□□□□ -0.3
CCM2-205ENST00000472223 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 C3orf56Q8N813 242 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 NECAP1Q8NC96 275 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 MISP3Q96FF7 219 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 USMG5Q96IX5 58 aa13.19□□□□□ -0.3
CCM2-205ENST00000472223 RPS10-NUDT3A0A1W2PQS6 291 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 E5RGE8 158 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 TSC22D2O75157 780 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 SCAF4O95104 1147 aaKnown RBP13.18□□□□□ -0.3
CCM2-205ENST00000472223 PSMB8P28062 276 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 CD83Q01151 205 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 ATP5G2Q06055 141 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 IL15RAQ13261 267 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
CCM2-205ENST00000472223 C2orf83Q53S99 150 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 ETFRF1Q6IPR1 90 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 CXorf58Q96LI9 332 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 FBXL7Q9UJT9 491 aa13.18□□□□□ -0.3
CCM2-205ENST00000472223 SOX15O60248 233 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 DEDDO75618 318 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 OR2J3O76001 311 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 MPC2O95563 127 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 PRH1P02810 166 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
CCM2-205ENST00000472223 NUP62P37198 522 aaPredicted RBP13.17□□□□□ -0.3
CCM2-205ENST00000472223 CAV2P51636 162 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 RHOGP84095 191 aa13.17□□□□□ -0.3
CCM2-205ENST00000472223 RNASEH2CQ8TDP1 164 aaKnown RBP13.17□□□□□ -0.3
CCM2-205ENST00000472223 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
CCM2-205ENST00000472223 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 CCNKO75909 580 aa13.16□□□□□ -0.3
CCM2-205ENST00000472223 OPRK1P41145 380 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms